diff --git a/modules/nf-core/checkm/lineagewf/main.nf b/modules/nf-core/checkm/lineagewf/main.nf
index 67fd8f359586..9b64750de0eb 100644
--- a/modules/nf-core/checkm/lineagewf/main.nf
+++ b/modules/nf-core/checkm/lineagewf/main.nf
@@ -5,7 +5,7 @@ process CHECKM_LINEAGEWF {
     conda "${moduleDir}/environment.yml"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/checkm-genome:1.2.3--pyhdfd78af_1' :
-        'biocontainers/checkm-genome:1.2.3--pyhdfd78af_1' }"
+        'biocontainers/checkm-genome:1.2.4--pyhdfd78af_1' }"
 
     input:
     tuple val(meta), path(fasta, stageAs: "input_bins/*")
diff --git a/modules/nf-core/checkm/qa/main.nf b/modules/nf-core/checkm/qa/main.nf
index 042f8b049cb6..e2938e99c427 100644
--- a/modules/nf-core/checkm/qa/main.nf
+++ b/modules/nf-core/checkm/qa/main.nf
@@ -5,7 +5,7 @@ process CHECKM_QA {
     conda "${moduleDir}/environment.yml"
     container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
         'https://depot.galaxyproject.org/singularity/checkm-genome:1.2.3--pyhdfd78af_1' :
-        'biocontainers/checkm-genome:1.2.3--pyhdfd78af_1' }"
+        'biocontainers/checkm-genome:1.2.4--pyhdfd78af_1' }"
 
     input:
     tuple val(meta), path(analysis_dir), path(marker_file), path(coverage_file)