update nftignore

Author: maxulysse

tests/.nftignore

@@ -1,10 +1,15 @@
 **/*DupRate_plot.{pdf,r}
+**/*Log.out
 **/*Log.{final,progress}.out
+**/*_fastqc.{html,zip}
+**/*_raw.{html,zip}
+**/*_{duprateExpBoxplot,duprateExpDens,expressionHist}.{pdf,png,svg}
 **/*bam_stat.txt
 **/*coverage.gtf
 **/*fastq.gz_trimming_report.txt
 **/*featureCounts.txt.summary
 **/*gene.abundance.txt
+**/*hisat2.summary
 **/*inner_distance*
 **/*junction*
 **/*markdup.sorted.MarkDuplicates.metrics.txt
@@ -13,25 +18,21 @@
 **/*sorted.bam.{flagstat,idxstats,stats}
 **/*sortmerna.log
 **/*splice_{events,junction}.{pdf,png,svg}
-**/*stats.txt
 **/*transcripts.gtf
 **/*{cnt,model,theta}
 **/*{css,gif,js}
 **/*{forward,reverse}.bigWig
 **/*{genes,isoforms}.results
 **/*{pos,seq}.DupRate.xls
-**/*_fastqc.{html,zip}
-**/*_raw.{html,zip}
-**/*_{duprateExpBoxplot,duprateExpDens,expressionHist}.{pdf,png,svg}
-**/*hisat2.summary
-**/Junction\sAnalysis.png
+**/*{salmon,star_salmon,star_rsem}_deseq2_clustering-plot*{pdf,png,txt}
+**/Junction*.png
 **/RAP1_IAA_30M_REP1.log
 **/RAP1_IAA_30M_REP1.txt
 **/RAP1_UNINDUCED_REP1.log
 **/RAP1_UNINDUCED_REP1.txt
 **/RAP1_UNINDUCED_REP2.log
 **/RAP1_UNINDUCED_REP2.txt
-**/Reads\sGenomic\sOrigin.png
+**/Reads*.png
 **/WT_REP1.log
 **/WT_REP1.txt
 **/WT_REP2.log
@@ -124,8 +125,8 @@
 **/star_summary_table.{pdf,png,svg,txt}
 **/t_data.ctab
 **/{kallisto,salmon}.merged*
-**/*{salmon,star_salmon,star_rsem}_deseq2_clustering-plot*{pdf,png,txt}
 **/{salmon,star_rsem}_deseq2_{clustering,pca}-plot.{pdf,png,svg}
 **/{salmon,star_rsem}_deseq2_{pca,pca}-plot.{pdf,png,svg}
 **/{samtools,star}_alignment_plot*
 **/{star_rsem,star_salmon}_deseq2_{clustering,pca}-plot*{pdf,png,svg}
+pipeline_info/*.{html,json,txt,yml}