Make output directory path instead of file?

adamrtalbot · web-flow · commit 0a1d53aad18f · 2023-11-28T14:03:09.000Z
diff --git a/.github/workflows/cloud_tests_full.yml b/.github/workflows/cloud_tests_full.yml
@@ -35,7 +35,7 @@ jobs:
             {
                 "hook_url": "${{ secrets.MEGATESTS_ALERTS_SLACK_HOOK_URL }}",
                 "aligner": "${{ matrix.aligner }}",
-                "outdir": "${{ secrets.TOWER_BUCKET_AWS }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}"
+                "outdir": "${{ secrets.TOWER_BUCKET_AWS }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}/"
             }
       - uses: actions/upload-artifact@v3
         with:
@@ -60,7 +60,7 @@ jobs:
             {
                 "hook_url": "${{ secrets.MEGATESTS_ALERTS_SLACK_HOOK_URL }}",
                 "aligner": "${{ matrix.aligner }}",
-                "outdir": "${{ secrets.TOWER_BUCKET_GCP }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}"
+                "outdir": "${{ secrets.TOWER_BUCKET_GCP }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}/"
             }
       - uses: actions/upload-artifact@v3
         with:
@@ -85,7 +85,7 @@ jobs:
             {
                 "hook_url": "${{ secrets.MEGATESTS_ALERTS_SLACK_HOOK_URL }}",
                 "aligner": "${{ matrix.aligner }}",
-                "outdir": "${{ secrets.TOWER_BUCKET_AZURE }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}",
+                "outdir": "${{ secrets.TOWER_BUCKET_AZURE }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}/",
                 "igenomes_base": "${{ secrets.TOWER_IGENOMES_BASE_AZURE }}"
             }
       - uses: actions/upload-artifact@v3

Original file line number	Diff line number	Diff line change
`@@ -35,7 +35,7 @@ jobs:`
`35`	`35`	`{`
`36`	`36`	`"hook_url": "${{ secrets.MEGATESTS_ALERTS_SLACK_HOOK_URL }}",`
`37`	`37`	`"aligner": "${{ matrix.aligner }}",`
`38`		`- "outdir": "${{ secrets.TOWER_BUCKET_AWS }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}"`
	`38`	`+ "outdir": "${{ secrets.TOWER_BUCKET_AWS }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}/"`
`39`	`39`	`}`
`40`	`40`	`- uses: actions/upload-artifact@v3`
`41`	`41`	`with:`
`@@ -60,7 +60,7 @@ jobs:`
`60`	`60`	`{`
`61`	`61`	`"hook_url": "${{ secrets.MEGATESTS_ALERTS_SLACK_HOOK_URL }}",`
`62`	`62`	`"aligner": "${{ matrix.aligner }}",`
`63`		`- "outdir": "${{ secrets.TOWER_BUCKET_GCP }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}"`
	`63`	`+ "outdir": "${{ secrets.TOWER_BUCKET_GCP }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}/"`
`64`	`64`	`}`
`65`	`65`	`- uses: actions/upload-artifact@v3`
`66`	`66`	`with:`
`@@ -85,7 +85,7 @@ jobs:`
`85`	`85`	`{`
`86`	`86`	`"hook_url": "${{ secrets.MEGATESTS_ALERTS_SLACK_HOOK_URL }}",`
`87`	`87`	`"aligner": "${{ matrix.aligner }}",`
`88`		`- "outdir": "${{ secrets.TOWER_BUCKET_AZURE }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}",`
	`88`	`+ "outdir": "${{ secrets.TOWER_BUCKET_AZURE }}/rnaseq/results-${{ github.sha }}/aligner_${{ matrix.aligner }}/",`
`89`	`89`	`"igenomes_base": "${{ secrets.TOWER_IGENOMES_BASE_AZURE }}"`
`90`	`90`	`}`
`91`	`91`	`- uses: actions/upload-artifact@v3`