Merge branch 'dev' into dev

Author: Shaun-Regenbaum

CHANGELOG.md

@@ -10,6 +10,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 Special thanks to the following for their contributions to the release:
 
 - [Adam Talbot](https://github.com/adamrtalbot)
+- [David Carlson](https://github.com/davidecarlson)
 - [Edmund Miller](https://github.com/edmundmiller)
 - [Jonathan Manning](https://github.com/pinin4fjords)
 - [Laramie Lindsey](https://github.com/laramiellindsey)
@@ -107,6 +108,8 @@ Thank you to everyone else that has contributed by reporting bugs, enhancements
 - [PR #1341](https://github.com/nf-core/rnaseq/pull/1341) - Add rename in the MultiQC report for samples without techreps
 - [PR #1342](https://github.com/nf-core/rnaseq/pull/1342) - Factor out preprocessing
 - [PR #1345](https://github.com/nf-core/rnaseq/pull/1345) - Fix preprocessing call
+- [PR #1350](https://github.com/nf-core/rnaseq/pull/1350) - Reduce resource usage for sort process in bedtools/genomecov
+- [PR #1353](https://github.com/nf-core/rnaseq/pull/1353) - Correct conditional for salmon indexing in preprocessing workflow
 
 ### Parameters
 

modules.json

@@ -12,7 +12,7 @@
                     },
                     "bedtools/genomecov": {
                         "branch": "master",
-                        "git_sha": "81b90194ce9911dbd55bba2c65c6919f6677abc4",
+                        "git_sha": "9ba6b02bbcb322ff4265cc51fca0ee5d8420b929",
                         "installed_by": ["modules"]
                     },
                     "bracken/bracken": {