Skip to content

Commit 3671d59

Browse files
authored
Merge pull request #1424 from nf-core/bump_sortmerna
patch sortmerna to 4.3.7 for ARM compatibility
2 parents 10b67df + 82dfdf2 commit 3671d59

File tree

8 files changed

+681
-160
lines changed

8 files changed

+681
-160
lines changed

CHANGELOG.md

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -12,6 +12,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
1212
- [PR #1418](https://github.com/nf-core/rnaseq/pull/1418) - Bump versions back to 3.17.0 after release
1313
- [PR #1422](https://github.com/nf-core/rnaseq/pull/1422) - Bump lots of modules so that conda versions have ARM builds
1414
- [PR #1423](https://github.com/nf-core/rnaseq/pull/1423) - Bump STAR version for version with ARM Conda build
15+
- [PR #1424](https://github.com/nf-core/rnaseq/pull/1424) - Patch sortmerna to 4.3.7 for ARM compatibility
1516

1617
## [[3.16.1](https://github.com/nf-core/rnaseq/releases/tag/3.16.1)] - 2024-10-16
1718

modules.json

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -215,7 +215,8 @@
215215
"sortmerna": {
216216
"branch": "master",
217217
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
218-
"installed_by": ["fastq_qc_trim_filter_setstrandedness", "modules"]
218+
"installed_by": ["fastq_qc_trim_filter_setstrandedness", "modules"],
219+
"patch": "modules/nf-core/sortmerna/sortmerna.diff"
219220
},
220221
"star/align": {
221222
"branch": "master",

modules/nf-core/sortmerna/environment.yml

Lines changed: 1 addition & 1 deletion
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

modules/nf-core/sortmerna/main.nf

Lines changed: 2 additions & 2 deletions
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

0 commit comments

Comments
 (0)