Merge pull request #1357 from nf-core/fix_anchor_issue

Work around anchor issue in multiqc

Author: pinin4fjords

CHANGELOG.md

@@ -111,6 +111,7 @@ Thank you to everyone else that has contributed by reporting bugs, enhancements
 - [PR #1353](https://github.com/nf-core/rnaseq/pull/1353) - Correct conditional for salmon indexing in preprocessing workflow
 - [PR #1352](https://github.com/nf-core/rnaseq/pull/1352) - Assorted fixes to MultiQC usage
 - [PR #1355](https://github.com/nf-core/rnaseq/pull/1355) - Make all curves on subway map better looking, and all lines now have the same width
+- [PR #1357](https://github.com/nf-core/rnaseq/pull/1357) - Fix anchor issue in multiqc
 
 ### Parameters
 

workflows/rnaseq/assets/multiqc/multiqc_config.yml

@@ -11,13 +11,13 @@ report_section_order:
   fail_strand_check-module:
     order: 5001
   # Preprocessing and pre-alignment QC
-  fastqc_raw:
+  fastqc:
     order: 4004
   cutadapt:
     order: 4003
   fastp:
     order: 4003
-  fastqc_trimmed:
+  fastqc-1:
     order: 4002
   # Alignment
   star:
@@ -99,15 +99,13 @@ run_modules:
 module_order:
   - fastqc:
       name: "FastQC (raw)"
-      anchor: "fastqc_raw"
       info: "This section of the report shows FastQC results before adapter trimming."
       path_filters:
         - "*_raw*fastqc.zip"
   - cutadapt
   - fastp
   - fastqc:
       name: "FastQC (trimmed)"
-      anchor: "fastqc_trimmed"
       info: "This section of the report shows FastQC results after adapter trimming."
       path_filters:
         - "*_trimmed*fastqc.zip"