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pinin4fjordspinin4fjords
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update samtools version
1 parent b0c583a commit 7955857

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7 files changed

+20
-20
lines changed

7 files changed

+20
-20
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‎tests/default.nf.test.snap‎

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},
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"TRIMGALORE": {
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},
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"STAR_ALIGN": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STRINGTIE_STRINGTIE": {

‎tests/featurecounts_group_type.nf.test.snap‎

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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"TRIMGALORE": {
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"STAR_ALIGN": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STRINGTIE_STRINGTIE": {

‎tests/min_mapped_reads.nf.test.snap‎

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},
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"STAR_ALIGN": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STRINGTIE_STRINGTIE": {
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"TRIMGALORE": {

‎tests/remove_ribo_rna.nf.test.snap‎

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"STAR_ALIGN": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STRINGTIE_STRINGTIE": {
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},
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.21,
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"gawk": "5.1.0"
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"TRIMGALORE": {

‎tests/skip_qc.nf.test.snap‎

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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.21,
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"gawk": "5.1.0"
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"TRIMGALORE": {
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"STAR_ALIGN": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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},
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STRINGTIE_STRINGTIE": {

‎tests/skip_trimming.nf.test.snap‎

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"STAR_ALIGN": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STRINGTIE_STRINGTIE": {

‎tests/umi.nf.test.snap‎

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"STAR_ALIGN": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"STRINGTIE_STRINGTIE": {
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},
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"STAR_GENOMEGENERATE": {
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"star": "2.7.11b",
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"samtools": 1.2,
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"samtools": 1.21,
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"gawk": "5.1.0"
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},
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"TRIMGALORE": {

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