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Fix anchor issue in multiqc
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workflows/rnaseq/assets/multiqc/multiqc_config.yml

Lines changed: 2 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -11,13 +11,13 @@ report_section_order:
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fail_strand_check-module:
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order: 5001
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# Preprocessing and pre-alignment QC
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fastqc_raw:
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fastqc:
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order: 4004
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cutadapt:
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order: 4003
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fastp:
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order: 4003
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fastqc_trimmed:
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fastqc-1:
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order: 4002
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# Alignment
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star:
@@ -99,15 +99,13 @@ run_modules:
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module_order:
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- fastqc:
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name: "FastQC (raw)"
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anchor: "fastqc_raw"
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info: "This section of the report shows FastQC results before adapter trimming."
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path_filters:
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- "*_raw*fastqc.zip"
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- cutadapt
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- fastp
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- fastqc:
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name: "FastQC (trimmed)"
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anchor: "fastqc_trimmed"
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info: "This section of the report shows FastQC results after adapter trimming."
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path_filters:
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- "*_trimmed*fastqc.zip"

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