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Patch umitools/dedup for stricter deps
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modules.json

Lines changed: 4 additions & 3 deletions
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@@ -5,10 +5,10 @@
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"https://github.com/nf-core/modules.git": {
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"modules": {
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"nf-core": {
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"bbmap/bbsplit": {
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"bbmap/bbsplit": {
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"branch": "master",
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"git_sha": "8864afe586537bf562eac7b83349c26207f3cb4d",
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"installed_by": ["fastq_qc_trim_filter_setstrandedness","modules"]
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"installed_by": ["fastq_qc_trim_filter_setstrandedness", "modules"]
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},
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"bedtools/genomecov": {
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"branch": "master",
@@ -275,7 +275,8 @@
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"umitools/dedup": {
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"branch": "master",
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"git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
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"installed_by": ["bam_dedup_stats_samtools_umitools"]
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"installed_by": ["bam_dedup_stats_samtools_umitools", "modules"],
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"patch": "modules/nf-core/umitools/dedup/umitools-dedup.diff"
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},
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"umitools/extract": {
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"branch": "master",

modules/nf-core/umitools/dedup/umitools-dedup.diff

Lines changed: 24 additions & 0 deletions
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