Fix #897

Author: drpatelh

CHANGELOG.md

@@ -9,6 +9,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 - Bump minimum Nextflow version from `21.10.3` -> `22.10.1`
 - Updated pipeline template to [nf-core/tools 2.7.1](https://github.com/nf-core/tools/releases/tag/2.7.1)
+- [[#897](https://github.com/nf-core/rnaseq/issues/897)] - Use `--skip_preseq` by default
 
 ### Parameters
 

nextflow.config

@@ -79,7 +79,7 @@ params {
     skip_bigwig                = false
     skip_stringtie             = false
     skip_fastqc                = false
-    skip_preseq                = false
+    skip_preseq                = true
     skip_dupradar              = false
     skip_qualimap              = false
     skip_rseqc                 = false

nextflow_schema.json

@@ -485,7 +485,8 @@
                 "skip_preseq": {
                     "type": "boolean",
                     "description": "Skip Preseq.",
-                    "fa_icon": "fas fa-fast-forward"
+                    "fa_icon": "fas fa-fast-forward",
+                    "default": true
                 },
                 "skip_dupradar": {
                     "type": "boolean",