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lines changed Original file line number Diff line number Diff line change @@ -210,15 +210,8 @@ process {
210210 container = { workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/4b/4bcb36d5e1fb90c8af0171a83b792ada446b04feb4ac3f26d0ce550d3c678383/data' : 'community.wave.seqera.io/library/grep_sed_tar:4b2523b1c76a5494' }
211211 }
212212
213- //// Remove this once we've got a new Biocontainer for trimgalore with the
214- //// newer cutadapt, and we've update the nf-core module
215- //// https://github.com/bioconda/bioconda-recipes/pull/51563
216-
217213 withName: TRIMGALORE {
218- //conda = 'bioconda::cutadapt=4.2 trim-galore=0.6.10'
219-
220- conda = 'bioconda::cutadapt=4.9 trim-galore=0.6.10'
221- container = { workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/0d/0dda1e09d10d1e2994ea85843b1e3d62212598ca5047e0ab419d5d87db637057/data' : 'community.wave.seqera.io/library/cutadapt_trim-galore:1cd58fa242e634da' }
214+ container = { workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/10/10e7b91ef06bdf5790120809afc8cf36aac0261b618d810c952d5afd60dd5ed2/data' : 'community.wave.seqera.io/library/cutadapt_trim-galore:2aa2fc797328573b' }
222215
223216 }
224217
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