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Commit ecf013d

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Hopefully last sort fix
1 parent 6bf3f92 commit ecf013d

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2 files changed

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-3
lines changed

2 files changed

+3
-3
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tests/sentieon_default.nf.test

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@@ -1,6 +1,6 @@
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nextflow_pipeline {
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name "Test pipeline with default settings"
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name "Test pipeline with sentieon"
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script "../main.nf"
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tag "pipeline"
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tests/sentieon_default.nf.test.snap

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@@ -697,8 +697,6 @@
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"salmon/WT_REP2/logs/salmon_quant.log",
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"salmon/WT_REP2/quant.genes.sf",
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"salmon/WT_REP2/quant.sf",
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"salmon/salmon.merged.gene.SummarizedExperiment.rds",
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"salmon/salmon.merged.transcript.SummarizedExperiment.rds",
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"salmon/deseq2_qc",
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"salmon/deseq2_qc/R_sessionInfo.log",
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"salmon/deseq2_qc/deseq2.dds.RData",
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"salmon/deseq2_qc/size_factors/WT_REP1.txt",
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"salmon/deseq2_qc/size_factors/WT_REP2.txt",
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"salmon/deseq2_qc/size_factors/deseq2.size_factors.RData",
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"salmon/salmon.merged.gene.SummarizedExperiment.rds",
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"salmon/salmon.merged.gene_counts.tsv",
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"salmon/salmon.merged.gene_counts_length_scaled.tsv",
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"salmon/salmon.merged.gene_counts_scaled.tsv",
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"salmon/salmon.merged.gene_lengths.tsv",
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"salmon/salmon.merged.gene_tpm.tsv",
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"salmon/salmon.merged.transcript.SummarizedExperiment.rds",
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"salmon/salmon.merged.transcript_counts.tsv",
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"salmon/salmon.merged.transcript_lengths.tsv",
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"salmon/salmon.merged.transcript_tpm.tsv",

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