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preprocess_transcripts_fasta_gencode
star_genomegenerate_igenomes Expand file tree Collapse file tree 8 files changed +0
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lines changed Original file line number Diff line number Diff line change 1- name : deseq2_qc
21channels :
32 - conda-forge
43 - bioconda
5- - defaults
64dependencies :
75 - conda-forge::r-base
86 - conda-forge::r-optparse
Original file line number Diff line number Diff line change 1- name : gtf2bed
21channels :
32 - conda-forge
43 - bioconda
5- - defaults
64dependencies :
75 - conda-forge::perl=5.26.2
Original file line number Diff line number Diff line change 1- name : gtf_filter
21channels :
32 - conda-forge
43 - bioconda
5- - defaults
64dependencies :
75 - conda-forge::python=3.9.5
Original file line number Diff line number Diff line change 1- name : multiqc_custom_biotype
21channels :
32 - conda-forge
43 - bioconda
5- - defaults
64dependencies :
75 - conda-forge::python=3.9.5
Original file line number Diff line number Diff line change 1- name : preprocess_transcripts_fasta_gencode
21channels :
32 - conda-forge
43 - bioconda
5- - defaults
64dependencies :
75 - conda-forge::sed=4.7
Original file line number Diff line number Diff line change 1- name : rsem_merge_counts
21channels :
32 - conda-forge
43 - bioconda
5- - defaults
64dependencies :
75 - conda-forge::sed=4.7
Original file line number Diff line number Diff line change 1- name : star_align_igenomes
21channels :
32 - conda-forge
43 - bioconda
5- - defaults
64dependencies :
75 - bioconda::star=2.6.1d
86 - bioconda::samtools=1.10
Original file line number Diff line number Diff line change 1- name : star_genomegenerate_igenomes
21channels :
32 - conda-forge
43 - bioconda
5- - defaults
64dependencies :
75 - bioconda::star=2.6.1d
86 - bioconda::samtools=1.10
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