Skip to content

Commit ffb223e

Browse files
authored
Merge pull request #1380 from nf-core/fix_tximport_summarizedexperiment
Fix issues with R modules changing sample names
2 parents 085ecfe + 765e67d commit ffb223e

File tree

6 files changed

+5
-8
lines changed

6 files changed

+5
-8
lines changed

CHANGELOG.md

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -6,6 +6,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
66
## v3.16.0dev - [date]
77

88
- [PR #1374](https://github.com/nf-core/rnaseq/pull/1374) - Bump pipeline version to 3.16.0dev
9+
- [PR #1380](https://github.com/nf-core/rnaseq/pull/1380) - Fix issues with R modules changing sample names
910

1011
### Credits
1112

modules.json

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -227,7 +227,7 @@
227227
},
228228
"summarizedexperiment/summarizedexperiment": {
229229
"branch": "master",
230-
"git_sha": "4e5f4687318f24ba944a13609d3ea6ebd890737d",
230+
"git_sha": "625fbbc0531fb1717349c7f1b1c677a3b8619767",
231231
"installed_by": ["modules", "quantify_pseudo_alignment"]
232232
},
233233
"trimgalore": {
@@ -237,7 +237,7 @@
237237
},
238238
"tximeta/tximport": {
239239
"branch": "master",
240-
"git_sha": "d612c281cf2fae62cdd79c70a22fc6349108570c",
240+
"git_sha": "625fbbc0531fb1717349c7f1b1c677a3b8619767",
241241
"installed_by": ["modules", "quantify_pseudo_alignment"]
242242
},
243243
"ucsc/bedclip": {

modules/nf-core/summarizedexperiment/summarizedexperiment/environment.yml

Lines changed: 0 additions & 2 deletions
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

modules/nf-core/summarizedexperiment/summarizedexperiment/templates/summarizedexperiment.r

Lines changed: 1 addition & 1 deletion
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

modules/nf-core/tximeta/tximport/environment.yml

Lines changed: 0 additions & 2 deletions
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

modules/nf-core/tximeta/tximport/templates/tximport.r

Lines changed: 1 addition & 1 deletion
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

0 commit comments

Comments
 (0)