ERROR Not able to pull image of ('biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0')

[ilariarossoni]

Description of the bug

Hi, when downloading the last version of nf-core/rnaseq offline pipeline (3.17.0), I got this error:

ERROR Not able to pull image of ('biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0', '/mypath/nf-core-rnaseq_3.17.0/singularity-images/biocontainers-bioconductor-tximeta-1.20.1--r43hdfd78af_0.img', '/mypath/biocontainers-bioconductor-tximeta-1.20.1--r43hdfd78af_0.img'). Service might be down or internet connection is dead.

I checked my internet connection but it was ok and I tried to download the 3.16.1 version but I got the same error.
I also tried the 3.12.0 version and I finally downloaded everything without problems.

Is it just me or is anyone else having this issue?

Thanks in advance.

Command used and terminal output

$ nf-core download nf-core/rnaseq --container-system singularity

Pulling singularity images ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━╺━━━━━━━━━━━━━━━━━━  85% • 35/41 completed
biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0 INFO:    Creating SIF file... ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
ERROR    "biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0" failed for unclear reasons.                                                                                  
                                                                                                                                                                                 
INFO     Pulling of "biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0" failed.                                                                                           
         Please troubleshoot the command                                                                                                                                         
         "singularity pull --name /mypath/biocontainers-bioconductor-tximeta-1.20.1--r43hdfd78af_0.img                                         
         docker://quay.io/biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0" manually.                                                                                    
                                                                                                                                                                                 
ERROR    "biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0" failed for unclear reasons.                                                                                  
Pulling singularity images ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━╺━━━━━━━━━━━━━━━━━━  85% • 35/41 completed
ERROR    Pulling of "biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0" failed.                                                                                           
         Please troubleshoot the command                                                                                                                                         
         "singularity pull --name /mypath/biocontainers-bioconductor-tximeta-1.20.1--r43hdfd78af_0.img                                         
         docker://quay.io/biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0" manually.                                                                                    
                                                                                                                                                                                 
ERROR    Not able to pull image of ('biocontainers/bioconductor-tximeta:1.20.1--r43hdfd78af_0',                                                                                  
         '/mypath/nf-core-rnaseq_3.17.0/singularity-images/biocontainers-bioconductor-tximeta-1.20.1--r43hdfd78af
         _0.img', '/mypath/biocontainers-bioconductor-tximeta-1.20.1--r43hdfd78af_0.img'). Service might be down or internet connection is     
         dead.

Relevant files

No response

System information

• Nextflow version 24.04.4
• nf-core version 2.14.1
• Version of nf-core/rnaseq 3.17.0, 3.16.1
• Singularity version 3.8.0-1.el8

[pinin4fjords]

Hi @ilariarossoni - this issue is over a year old now. Container registry issues like this are often transient.

Are you still experiencing this problem? If so, could you retry with a current version of nf-core tools and let us know?

If we don't hear back in a couple of weeks, we'll assume it's resolved and close this issue.