FIX: Remove diff for bwamem2/mem (#182)

Author: maxulysse

CHANGELOG.md

@@ -9,6 +9,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ### `Fixed`
 
+- [#182](https://github.com/nf-core/seqinspector/pull/182) Keep modules diff to a minimum
+
 ### `Changed`
 
 - [#180](https://github.com/nf-core/seqinspector/pull/180) Add Zenodo record

conf/base.config

@@ -60,4 +60,10 @@ process {
         ext.use_gpu = { workflow.profile.contains('gpu') }
         accelerator = { workflow.profile.contains('gpu') ? 1 : null }
     }
+    // Label process_low is enough most of the time for this process
+    // especially when using SEQTK_SAMPLE to subsample
+    withName: BWAMEM2_MEM {
+        cpus   = { 2 * task.attempt }
+        memory = { 12.GB * task.attempt }
+    }
 }

modules.json

@@ -13,8 +13,7 @@
                     "bwamem2/mem": {
                         "branch": "master",
                         "git_sha": "8325a8155a77a336a613a504b8e4d6cea7a2344a",
-                        "installed_by": ["modules"],
-                        "patch": "modules/nf-core/bwamem2/mem/bwamem2-mem.diff"
+                        "installed_by": ["modules"]
                     },
                     "fastqc": {
                         "branch": "master",