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update changelog and bump version
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CHANGELOG.md

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# nf-core/tools: Changelog
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## [v3.3.1 - Tungsten Tamarin Patch](https://github.com/nf-core/tools/releases/tag/3.3.1) - [2025-06-02]
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### Template
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- Fix nf-test.yml file formatting ([#3601](https://github.com/nf-core/tools/pull/3601))
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## [v3.3.0 - Tungsten Tamarin](https://github.com/nf-core/tools/releases/tag/3.3.0) - [2025-06-02]
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**Highlights**

setup.py

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from setuptools import find_packages, setup
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version = "3.3.0"
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version = "3.3.1"
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with open("README.md") as f:
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readme = f.read()

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