Merge pull request #3564 from fntlnz/snapshot-exit-code

Make jobs automatically resubmit for exit code 175

Author: mirpedrol

CHANGELOG.md

@@ -13,6 +13,7 @@
 - run nf-test tests on runsOn runners ([#3525](https://github.com/nf-core/tools/pull/3525))
 - Include the centralized nf-core configs also in offline mode, if a local copy is available. ([#3491](https://github.com/nf-core/tools/pull/3491))
 - downgrade nf-schema to fix CI tests ([#3544](https://github.com/nf-core/tools/pull/3544))
+- Make jobs automatically resubmit for exit code 175 ([#3564](https://github.com/nf-core/tools/pull/3564))
 - bump nf-schema back to 2.3.0 ([#3577](https://github.com/nf-core/tools/pull/3577))
 
 ### Linting

nf_core/pipeline-template/conf/base.config

@@ -15,7 +15,7 @@ process {
     memory = { 6.GB   * task.attempt }
     time   = { 4.h    * task.attempt }
 
-    errorStrategy = { task.exitStatus in ((130..145) + 104) ? 'retry' : 'finish' }
+    errorStrategy = { task.exitStatus in ((130..145) + 104 + 175) ? 'retry' : 'finish' }
     maxRetries    = 1
     maxErrors     = '-1'
 

nf_core/pipeline-template/nextflow.config

@@ -83,7 +83,9 @@ process {
     memory = { 6.GB * task.attempt }
     time   = { 4.h  * task.attempt }
 
-    errorStrategy = { task.exitStatus in ((130..145) + 104) ? 'retry' : 'finish' }
+    // 175 signals that the Pipeline had an unrecoverable error while
+    // restoring a Snapshot via Fusion Snapshots.
+    errorStrategy = { task.exitStatus in ((130..145) + 104 + 175) ? 'retry' : 'finish' }
     maxRetries    = 1
     maxErrors     = '-1'
 }