Add results up to 216 (end)

Author: niklases

scripts/ProteinGym_runs/mut_performance.png

@@ -202,3 +202,5 @@ No.,Dataset,N_Variants,N_Max_Muts,Untrained_Performance_DCA,Untrained_Performanc
 212,UBR5_HUMAN_Tsuboyama_2023_1I2T,1453,2,0.3954775984769403,0.37884552147719175,0.72865082368318,0.4135264266552914,0.6216402683735611,0.841293488174663,0.5837830827149355,0.7358503263516892,0.8449776210695993,0.6516775747242083,0.8581339669400039,0.9139968724351658,1453,1353,1253,453,431
 213,VILI_CHICK_Tsuboyama_2023_1YU5,2568,2,0.4303431112861798,0.4863800192346478,0.8307829597722179,0.5741085464525874,0.7093471750608235,0.8852374884736548,0.5803900347090506,0.7534407317813456,0.9046098609294685,0.6392490902865371,0.8753302193318957,0.9113520493763695,2568,2468,2368,1568,610
 214,YAIA_ECOLI_Tsuboyama_2023_2KVT,1890,2,0.3780347939926742,0.15327111285962208,0.7903070808881091,0.45183457512810316,0.5209975026793393,0.8366684619054859,0.436643243982704,0.7259450644566509,0.8654925820935659,0.5110544601338339,0.8765923585550542,0.8975759797134655,1890,1790,1690,890,456
+215,YAP1_HUMAN_Araya_2012,10075,2,0.32479319470278284,0.30204371243221395,0.5308274196329236,0.41965692850970615,0.40292418038237016,0.5268850077023881,0.4803229958746167,0.46126213591025056,0.5317233775861774,0.5778684614801672,0.6221954405153893,0.6262788626017534,10075,9975,9875,9075,4250
+216,YNZC_BACSU_Tsuboyama_2023_2JVD,2300,2,0.6082060101896964,0.2547404804907313,0.6899018383146401,0.6441407339983907,0.7473713910090336,0.7968152807093932,0.650026034046947,0.7653789908560225,0.8486109446153745,0.6564610103363941,0.8915834745735776,0.8561248306610288,2300,2200,2100,1300,478

scripts/ProteinGym_runs/mut_performance_violin.png

@@ -154,3 +154,49 @@ No.,Dataset,N_Variants,N_Max_Muts,Untrained_Performance_DCA,Untrained_Performanc
 167,GFP_AEQVI_Sarkisyan_2016,51714,15,0.6406366653494072,0.1336688728267403,0.6860965519817945,0.6422492276272843,0.6495590297325259,nan,0.6486786880849276,0.6360629034990605,nan,0.7463828216993244,0.7711781697848346,nan,51714,51614,51514,50714,8310
 168,GRB2_HUMAN_Faure_2021,63366,2,0.5258434005381363,0.5367412810228084,0.7216670654700138,0.5839763004949682,0.6852622116666458,0.697364904206813,0.6746840807821936,0.7103753714289707,0.7316071269759475,0.708765178129165,0.7742172713240596,0.7938850307943259,63366,63266,63166,62366,13344
 169,HECD1_HUMAN_Tsuboyama_2023_3DKM,5586,2,0.28623326119763287,0.2150000228393089,0.2406307470397028,0.5991137006846494,0.6520916880669738,0.7123845116845012,0.671240119874008,0.6713008248409833,0.715769538708621,0.6959516975099861,0.7840773924211748,0.7706682813598381,5586,5486,5386,4586,986
+171,ISDH_STAAW_Tsuboyama_2023_2LHR,1944,2,0.20133105028259743,0.4099797311289111,0.6170821214186833,0.20801835436717128,0.5463153858513373,0.7901066784963037,0.27927295081872605,0.6608119258589598,0.8602977148353521,0.3815799941028187,0.8616768816914405,0.8570970243337553,1944,1844,1744,944,465
+172,MAFG_MOUSE_Tsuboyama_2023_1K1V,1429,2,0.3772754724604933,0.2867701014285044,0.7883997038650642,0.5667968813528276,0.7212985249027445,0.8518818361413882,0.5870433889556854,0.805020022074178,0.8660043558185719,0.6537497661951548,0.9156898969137485,0.9121471008886789,1429,1329,1229,429,385
+173,MBD11_ARATH_Tsuboyama_2023_6ACV,2116,2,0.7329834422357441,0.27532090639771084,0.7881088186243161,0.7839860922931414,0.792328599906371,0.8356866331913111,0.8077768572836533,0.8161648125358435,0.8760480892176334,0.8367560823060701,0.9079456651452383,0.8812386007566525,2116,2016,1916,1116,547
+174,MYO3_YEAST_Tsuboyama_2023_2BTT,3297,2,0.22736027288974528,0.39038676871890193,0.655911044328377,0.5293937331055336,0.6012770298659345,0.7467316039573004,0.502079452467581,0.6801520002381222,0.7899160469479081,0.5706408172217424,0.8152869780272132,0.7444738342715336,3297,3197,3097,2297,635
+175,NKX31_HUMAN_Tsuboyama_2023_2L9R,2482,2,0.5196042879352247,0.5522653235349196,0.6723568827321114,0.5237224856829698,0.6334523075196178,0.7854217747657275,0.5859761902998967,0.669134199661453,0.8185506698606887,0.626925034108479,0.8429564399261074,0.8636033602875912,2482,2382,2282,1482,544
+176,NUSA_ECOLI_Tsuboyama_2023_1WCL,2028,2,0.6014145743469108,0.39213099588495737,0.829129913783728,0.6686314477896026,0.6983392057013559,0.8570870095474957,0.6853797626050436,0.816717565342857,0.8440539539328691,0.7662356414959274,0.9255284813365755,0.8856793894101138,2028,1928,1828,1028,541
+177,NUSG_MYCTU_Tsuboyama_2023_2MI6,1380,2,0.3185563959299844,0.2650521655606262,0.6835605718997004,0.3404721732075912,0.4558591358775928,0.8713252426606706,0.3235636303747638,0.6424823794937596,0.8674173793039379,0.4194035805811384,0.8575977220627845,0.9002750055493168,1380,1280,1180,380,417
+178,OBSCN_HUMAN_Tsuboyama_2023_1V1C,3197,2,0.7049347544997513,0.5640843767042256,0.8046058299987234,0.7294521912125891,0.7331462357273572,0.8695220703317328,0.7605979822734487,0.8278244858240499,0.8694298657950439,0.7996494573669364,0.9074278259681756,0.9075736567483621,3197,3097,2997,2197,679
+179,ODP2_GEOSE_Tsuboyama_2023_1W4G,1134,2,0.12554037717520414,-0.06007588981415863,0.2347909925259055,0.256965178026339,0.46200581622369263,0.5963034456602403,0.32498630193680217,0.46800164167292563,0.7732094387197265,0.45782583926520193,0.6956350462427737,0.8596541104003791,1134,1034,934,134,371
+180,PABP_YEAST_Melamed_2013,37708,2,0.6282349395615039,0.6187616937806348,0.726758973687955,0.705030508811938,0.7401796671480408,0.7491737079223693,0.7217315324275344,0.7778647633866328,0.7720861996641367,0.7640660118093641,0.8346626364747024,0.8343864537497722,37708,37608,37508,36708,14995
+181,PHOT_CHLRE_Chen_2023,167529,15,0.6162391522807135,0.55127891627261,0.43552767595262376,0.752744843654709,0.8162100696357459,0.8836636631332063,0.8075607509384554,0.8995938215109279,0.8903299104892745,0.8289036406452397,0.9364990189605585,0.9299153395534799,167529,167429,167329,166529,24336
+182,PIN1_HUMAN_Tsuboyama_2023_1I6C,802,2,0.7046422859986546,0.61211746983825,0.7615644611960196,0.7460117622803817,0.7665498863311447,0.8075562900249437,0.730571206608264,0.802813961604097,0.8171954694111161,nan,nan,nan,802,702,602,nan,121
+183,PITX2_HUMAN_Tsuboyama_2023_2L7M,1824,2,0.3976757742162949,0.45604969589655525,0.5283860931832735,0.4067389135942343,0.5713471426556669,0.7708740002033948,0.4029593159068464,0.7008539809705787,0.7629425586205497,0.43660382453030433,0.8654086148937546,0.8239786414201589,1824,1724,1624,824,450
+184,POLG_PESV_Tsuboyama_2023_2MXD,5130,2,0.404342321796513,0.15112084761248584,0.8007328043302355,0.5913277990659709,0.5852679992680927,0.8809633757615862,0.6054538290947755,0.7189910357802378,0.8820096955241113,0.6534144700319552,0.849304105585031,0.9226100190532959,5130,5030,4930,4130,789
+185,PR40A_HUMAN_Tsuboyama_2023_1UZC,2033,2,0.7610825423973049,0.5114335147260686,0.8747276321474617,0.7786638935945559,0.7778159477965594,0.8838496995498857,0.7694818404676038,0.805523179209308,0.8833636029625895,0.8288174902988124,0.8972238593814125,0.9062257085605107,2033,1933,1833,1033,495
+186,PSAE_PICP2_Tsuboyama_2023_1PSE,1579,2,0.2981323453928574,0.5041075580504063,0.7386590155486578,0.296068963468044,0.5940857599364789,0.7617629662808856,0.3584970064383994,0.6302897303957555,0.7195658282910461,0.4478933679698769,0.77574347571904,0.8185487405821089,1579,1479,1379,579,478
+187,Q6WV12_9MAXI_Somermeyer_2022,31401,13,0.3769654329384654,0.025417559023311723,0.17332059621454582,0.4955393954732307,0.49559530518589173,0.4804409256844832,0.5576146446419249,0.5817887779706749,0.6097326385836637,0.6963955820667598,0.7135017186144601,0.768906240890393,31401,31301,31201,30401,6947
+188,Q8WTC7_9CNID_Somermeyer_2022,33510,43,0.354794801747493,0.039661438545157274,0.2903938212699036,0.3690794987280504,0.3936407098648095,0.34928866750875387,0.4441710534915808,0.38550742485653133,0.48404623240803735,0.568377406077305,0.558713686608769,0.6345332729515392,33510,33410,33310,32510,6232
+189,RAD_ANTMA_Tsuboyama_2023_2CJJ,912,2,0.5698194722572848,0.5223162306233462,0.6711615816044391,0.507947592807267,0.621230025549148,0.7335345218145165,0.607022032851225,0.6309681498570893,0.7992302372402881,nan,nan,nan,912,812,712,nan,144
+190,RASK_HUMAN_Weng_2022_abundance,26012,2,0.3919551862144626,0.27619668716138834,0.3863967475342869,0.3707638341050823,0.5630026719161997,0.4328266207137911,0.6007019510743175,0.6074163233688947,0.6725162418576177,0.6829401831725462,0.7193477038640304,0.757027711502453,26012,25912,25812,25012,5666
+191,RASK_HUMAN_Weng_2022_binding-DARPin_K55,24873,2,0.5362425938467722,0.5637909846916977,0.6797871477862846,0.6877110122988653,0.7359746083523336,0.8054868389420371,0.7068101509950504,0.7696285539238639,0.7691615623894129,0.8011729295050047,0.8766168549315041,0.8509487862931702,24873,24773,24673,23873,5451
+192,RBP1_HUMAN_Tsuboyama_2023_2KWH,1332,2,0.20369004743968985,0.28819080884410037,0.5302382614355236,0.2072646595456987,0.43793985700229887,0.7363321096651663,0.242236388362182,0.4829254089611372,0.7956519732484129,0.36234000318569876,0.8267529387192581,0.858525799122021,1332,1232,1132,332,401
+193,RCD1_ARATH_Tsuboyama_2023_5OAO,1261,2,0.26083771574560255,0.3849581348121436,0.5917005470716648,0.27476968513084565,0.451481788462958,0.7453161559822364,0.3041448505191112,0.5938752051702719,0.7072561088393217,0.5108027471138726,0.8139558114388566,0.6769547991711721,1261,1161,1061,261,404
+194,RCRO_LAMBD_Tsuboyama_2023_1ORC,2278,2,0.36751590074110235,0.4357072002283556,0.7908166213601239,0.4812669537991807,0.6713951022249491,0.8795023960788044,0.5837697779889632,0.7382951112862096,0.883618435083841,0.6534304217254977,0.8819571577426845,0.9121334635897187,2278,2178,2078,1278,531
+195,RD23A_HUMAN_Tsuboyama_2023_1IFY,1019,2,0.5467966084398616,0.57577943866169,0.6608908151795647,0.6125382745262029,0.6599314688089174,0.8382823571465456,0.6506746012099615,0.7660020769339418,0.8634200951214489,nan,nan,nan,1019,919,819,nan,141
+196,RFAH_ECOLI_Tsuboyama_2023_2LCL,1326,2,0.1041920520834348,0.0828264394106899,0.4918509535164395,0.108757740797348,0.08751304673653487,0.6209160975302425,0.11295175494813652,0.4824914478799274,0.6613386078193729,0.33502483411563766,0.7455949394803226,0.553733412419741,1326,1226,1126,326,410
+197,RL20_AQUAE_Tsuboyama_2023_1GYZ,1461,2,0.009891627315487806,0.5889224460775373,0.8121761838765689,0.011267760100736364,0.6779818033666426,0.8277721821313727,0.1252240882145176,0.717606495359553,0.8534353937706497,0.24191072312960119,0.7974426489938438,0.8911930095745998,1461,1361,1261,461,439
+198,RPC1_BP434_Tsuboyama_2023_1R69,1459,2,0.3374685418350152,0.6950267254496277,0.7576193005880986,0.36653986407338934,0.7081010293435714,0.7248445633459228,0.43323294447445615,0.7858336403160003,0.8427189659540264,0.5165052557374,0.8982640520690766,0.8650365886497626,1459,1359,1259,459,444
+199,SAV1_MOUSE_Tsuboyama_2023_2YSB,965,2,0.4958021163756223,0.49659031174101015,0.5127792230129212,0.5994624186500787,0.6404565773688996,0.6915248464433142,0.5669425471136018,0.6953455270972739,0.7073857826317819,nan,nan,nan,965,865,765,nan,145
+200,SDA_BACSU_Tsuboyama_2023_1PV0,2770,2,0.3192645863611736,0.24401773791062256,0.7007404187757136,0.3548530650787115,0.6303708516053498,0.8986956100731763,0.3315423884411001,0.8330530598400682,0.8887525193737473,0.35991732115973546,0.9444141645479749,0.926677502319412,2770,2670,2570,1770,533
+201,SPA_STAAU_Tsuboyama_2023_1LP1,2105,2,0.476156970087323,-0.04643202441018253,0.6436875598271453,0.6008074858800082,0.49914972031571253,0.7265633297071469,0.622260153418572,0.6086521038635364,0.7527742927032584,0.6737115415549932,0.8052044242282936,0.7258668401105839,2105,2005,1905,1105,489
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+208,TCRG1_MOUSE_Tsuboyama_2023_1E0L,1058,2,0.6023245350036679,0.6934823699496389,0.7047503389751139,0.5607249097202517,0.7651241918895821,0.8625853295363091,0.6352770817788634,0.8753524408835391,0.872213596204071,0.8351801982114617,0.9420468178043006,0.9234673475037682,1058,958,858,58,351
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