Results up to 120

Author: niklases

scripts/ProteinGym_runs/mut_performance.png

@@ -83,3 +83,31 @@ No.,Dataset,N_Variants,N_Max_Muts,Untrained_Performance_DCA,Untrained_Performanc
 90,PAI1_HUMAN_Huttinger_2021,5345,1,0.396678412696177,0.379194385056333,0.408186605789612,0.358264791940779,0.375213275140828,0.454164202610093,0.345893565335981,0.407202348542484,0.412791078897868,0.41638343526125,0.450265913250656,0.484108379867112,5345,5245,5145,4345,2583
 91,PKN1_HUMAN_Tsuboyama_2023_1URF,1301,1,0.231448209799655,0.263187055065297,0.541382363142796,0.317090374670117,0.490193825638318,0.7534650894083,0.468624051712598,0.551974655471794,0.694229924918641,0.658183307484806,0.827724423500768,0.875052254075818,1301,1201,1101,301,452
 92,POLG_CXB3N_Mattenberger_2021,15711,1,PDBseq neq WTseq
+93,POLG_DEN26_Suphatrakul_2023,16897,1,0.5715110666825278,0.0417708828279086,0.38599571783138553,0.5689323609084663,nan,0.4404194753174697,0.5214700356904979,nan,0.5754646979385186,0.596785504702855,nan,0.6481003392083803,16897,16797,16697,15897,4882
+94,POLG_HCVJF_Qi_2014,1630,1,PDBseq neq WTseq
+95,PPARG_HUMAN_Majithia_2016,9576,1,0.6715161827236812,0.586667826645904,0.48245081579962623,0.7003762657486869,0.6837398595681126,0.7251605802464957,0.6954217434880398,0.7159416796041094,0.7562700348441727,0.7823657082300995,0.8236134642784526,0.8699885486198495,9576,9476,9376,8576,4273
+96,PPM1D_HUMAN_Miller_2022,7889,1,0.5573778634048158,0.5866036525237758,0.514260114136614,0.5561191196097769,0.5952765955359727,0.5224565909145598,0.5689545429418112,0.5964625218091218,0.5868773302017842,0.6077949186548685,0.6362408160633111,0.6360228528364357,7889,7789,7689,6889,4603
+97,PRKN_HUMAN_Clausen_2023,8756,1,0.5962501835155871,0.6018582904923971,0.6226980451541889,0.6171481531169547,0.6236409731445774,0.7053930234786773,0.6292735604506721,0.6878696778866592,0.7149583276475163,0.710298630612104,0.7510451966551778,0.774615890560068,8756,8656,8556,7756,3850
+98,PTEN_HUMAN_Matreyek_2021,5083,1,0.49919654187469903,0.4186132337085657,0.49175224574283727,0.49640802903211845,0.49735278673361333,0.5498769685945196,0.5152406724184921,0.5117580567338947,0.5622049482664137,0.5890118293737017,0.613722330544265,0.6196564135446784,5083,4983,4883,4083,2484
+99,PTEN_HUMAN_Mighell_2018,7260,1,0.48883263771209456,0.4712475544694836,0.51091220943276,0.4838039551464116,0.4752019085655886,0.5418261111042733,0.46688427794755344,0.5174719317416094,0.508121848542079,0.5096192762098141,0.543902048466406,0.5521531419410431,7260,7160,7060,6260,3024
+100,Q2N0S5_9HIV1_Haddox_2018,12729,1,0.4985132761350018,0.510732252954268,0.47982601020407517,0.40731359707879167,0.5238214241366645,0.5287167164880395,0.5246332309354711,0.5550434749948826,0.5636015974375116,0.6039506163925715,0.6760947197845882,0.6888984410217187,12729,12629,12529,11729,9942
+101,Q53Z42_HUMAN_McShan_2019_binding-TAPBPR,3344,1,0.3246359456014145,0.29758327493409265,0.4106333338290412,0.37075469244733145,0.40449067072813233,0.4996400194248783,0.4425270664697464,0.4932130633598333,0.5447454975738951,0.5965253583905582,0.6633534323593225,0.7087118038867276,3344,3244,3144,2344,1837
+102,Q53Z42_HUMAN_McShan_2019_expression,3344,1,0.4888910056232061,0.507302475865562,0.5893382168110505,0.4881113050353449,0.5175968927874474,0.6256730558395768,0.5218243366510312,0.570919458924973,0.635115714988977,0.6089645693686795,0.6798988991866403,0.6769810505676497,3344,3244,3144,2344,1840
+103,Q59976_STRSQ_Romero_2015,2999,1,0.5563909631290627,0.4798376867752586,0.5526012768121407,0.5566018769312013,0.5310510133461893,0.61255491787639,0.4468974980238075,0.5648912437369122,0.5934325716673482,0.5649930735991615,0.6162958800942003,0.6529703307261818,2999,2899,2799,1999,2409
+104,Q837P4_ENTFA_Meier_2023,697,1,0.487472451534693,0.421019817684848,0.6201170342099215,0.5386499621459804,0.4532563895386621,0.6620289538592855,0.5989895572070829,0.6117242859538765,0.7082016171113746,nan,nan,nan,697,597,497,nan,867
+105,Q837P5_ENTFA_Meier_2023,747,1,0.23793446180683128,0.3489324245124611,0.5532482365502226,0.4118462670365513,0.479425650426842,0.5393467898109469,0.529566817627694,0.6360156810322944,0.6126126172363778,nan,nan,nan,747,647,547,nan,860
+106,R1AB_SARS2_Flynn_2022,5725,1,-0.13308452198819254,-0.014312799999516335,0.4197710947928601,0.0010026360189352367,0.0018307430575922425,0.48950971518977204,0.1432895103546084,0.2699670200319928,0.5378444577922395,0.6618378044567588,0.6809090195827939,0.7481862084599961,5725,5625,5525,4725,2082
+107,RAF1_HUMAN_Zinkus-Boltz_2019,297,1,nan,0.504695122685066,0.3276645836638599,nan,0.5454917554305644,0.38397941966578225,nan,0.5381081559087686,0.34493454587580896,nan,nan,nan,297,197,97,nan,745
+108,RASH_HUMAN_Bandaru_2017,3134,1,0.4116117232270029,0.4077147691727097,0.577920119698706,0.46936451513587973,0.46418486878143156,0.598428058725243,0.4949724506892044,0.5178201587360463,0.603215597177973,0.6639350600661369,0.7632545837884243,0.7921642777079697,3134,3034,2934,2134,1196
+109,RDRP_I33A0_Li_2023,12003,1,0.010612561390962732,0.09062643130883237,0.2912378162740548,0.011216996631298931,0.12784717604037876,0.331862834713568,0.10884093665356365,0.12136460423982688,0.3588793502912964,0.3188307897367616,0.3766665663379784,0.4695558638623408,12003,11903,11803,11003,7894
+110,REV_HV1H2_Fernandes_2016,2147,1,0.23720496617372328,0.2513114871226821,0.3117736031766024,0.23797585957369158,0.2533941311345016,0.3290667036203396,0.3759043042903253,0.3644034569882168,0.38965022581053743,0.48556908271769456,0.5157438144725295,0.5137403759793682,2147,2047,1947,1147,705
+111,RL40A_YEAST_Mavor_2016,1253,1,0.37078063939632677,0.3584498063034124,0.6026444643923916,0.42554177046710784,0.5714530664562807,0.6279858566992864,0.596803627058248,0.6405529332266452,0.627091773721076,0.6811522055952645,0.7344851816902986,0.7135885899622143,1253,1153,1053,253,599
+112,RL40A_YEAST_Roscoe_2013,1195,1,0.40935800206816536,0.41702794770370233,0.6750321402953536,0.6419206439605348,0.5666630046318951,0.6642073269821097,0.7114105822706459,0.7092731603034689,0.7562274171760599,0.7320493939050638,0.8180032044538671,0.8174205764780138,1195,1095,995,195,586
+113,RL40A_YEAST_Roscoe_2014,1380,1,0.3209209454656509,0.3042361076278841,0.703087813606214,0.5849434416014238,0.6344642639704979,0.700612476722703,0.5997944711146276,0.6800725186640139,0.7435989107008961,0.6900619178648225,0.7466880693516977,0.7568583540999884,1380,1280,1180,380,606
+114,RNC_ECOLI_Weeks_2023,4277,1,0.5595823036227145,0.5644425103470978,0.5432535586389563,0.4703988231575261,0.5785957967441608,0.5932190455516344,0.5845684234738608,0.6107377511304559,0.5841368361522852,0.6157429899192753,0.6671608830430534,0.6707845720283434,4277,4177,4077,3277,1397
+115,RPC1_LAMBD_Li_2019_high-expression,351,1,0.4126281653979087,0.4165290265290265,0.5169588744588745,0.3235227716419689,0.4356220830961867,0.5381650540694366,0.41850267864554896,0.4673231090972464,0.5114081561519693,nan,nan,nan,351,251,151,nan,257
+116,RPC1_LAMBD_Li_2019_low-expression,351,1,0.43562450336094155,0.453533411033411,0.6083732933732934,0.4683484266527567,0.5017082147600076,0.6233837981407703,0.46199185079350275,0.510700592540955,0.6479505054025793,nan,nan,nan,351,251,151,nan,255
+117,RS15_GEOSE_Tsuboyama_2023_1A32,1195,1,0.27808991214230616,0.33759966579115713,0.6264644826123313,0.44248056196455765,0.45471175140725306,0.7564066262477956,0.6234597762800392,0.5357112605907214,0.8579495864817774,0.6738682014734069,0.8462319040227865,0.9101150690252309,1195,1095,995,195,418
+118,S22A1_HUMAN_Yee_2023_abundance,9803,1,0.5783901778318246,0.6049457579599515,0.6265223214824237,0.5827395139508005,0.6325708009489824,0.6378514151439854,0.5657640807536206,0.6308098142704518,0.6459163580319655,0.6334508915409808,0.7103271508280004,0.7154079417238408,9803,9703,9603,8803,5032
+119,S22A1_HUMAN_Yee_2023_activity,10094,1,0.5427328121851095,0.5559350277107161,0.563158678641977,0.5432530125807854,0.5870974556591995,0.6114640727988875,0.5511329675329357,0.6063675579244358,0.6006432373043168,0.6011629865892636,0.6539786983369106,0.6591219477477889,10094,9994,9894,9094,5130
+120,SBI_STAAM_Tsuboyama_2023_2JVG,1025,1,0.47470827802722126,0.21294576254348396,0.6816863232777064,0.5377788988571398,0.443964729828563,0.7822287081898315,0.5227508790754878,0.6193069804052069,0.801038448140637,nan,nan,nan,1025,925,825,nan,153