File tree Expand file tree Collapse file tree 1 file changed +4
-4
lines changed Expand file tree Collapse file tree 1 file changed +4
-4
lines changed Original file line number Diff line number Diff line change @@ -135,21 +135,21 @@ for i in `ls -d ${INPUT_DIR}/*`; do
135135swarm -f defacing_parallel_session_level.swarm --merge-output --logdir ${OUTPUT_DIR} /swarm_log
136136```
137137
138- ### Visually inspect defaced scans using VisualQC
138+ ### Visual Inspection
139139
140- To visually inspect quality of defacing with visualqc, we'll need to:
140+ To visually inspect quality of defacing with [ VisualQC ] ( https://raamana.github.io/ visualqc/readme.html ) , we'll need to:
141141
1421421 . Generate 3D renders for every defaced image in the output directory.
143143
144144 ``` bash
145- python src/generate_renders.py -o < path/to/desired/defacing/output/directory >
145+ python src/generate_renders.py -o ${OUTPUT_DIR}
146146 ```
147147
1481482 . Open TurboVNC through an spersist session. More info [ here] ( https://hpc.nih.gov/docs/nimh.html ) .
1491493 . Run the ` vqcdeface ` command from a command-line terminal within a TurboVNC instance
150150
151151 ``` bash
152- sh < path/to/defacing/output/directory > /QC_prep/defacing_qc_cmd
152+ sh ${OUTPUT_DIR} /QC_prep/defacing_qc_cmd
153153 ```
154154
155155## Terminology
You can’t perform that action at this time.
0 commit comments