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slimnsouroesteban
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Further decreasing eddy --sloppy runtime and fixed eddy report
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dmriprep/config/reports-spec.yml

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@@ -94,8 +94,8 @@ sections:
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- bids: {datatype: figures, desc: eddy, suffix: dwi}
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caption: Head-motion and eddy current corrected diffusion data
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description: Geometrical distortions derived from the so-called Eddy-currents,
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and head-motion realignment parameters were estimated with the joint modeling of
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<code>{eddy_openmp}</code>, included in FSL.
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and head-motion realignment parameters were estimated with the joint modeling
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of <code>eddy_openmp</code>, included in FSL.
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static: false
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subtitle: Eddy corrected diffusion data
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- name: About

dmriprep/workflows/dwi/eddy.py

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@@ -117,6 +117,8 @@ def init_eddy_wf(debug=False, name="eddy_wf"):
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if debug:
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eddy.inputs.niter = 1
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eddy.inputs.is_shelled = True
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eddy.inputs.dont_peas = True
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eddy.inputs.nvoxhp = 10
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# Generate the acqp and index files for eddy
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gen_eddy_files = pe.Node(

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