Skip to content

Commit 69c784f

Browse files
committed
add: long_description.rst based on fmriprep's
1 parent 678498a commit 69c784f

File tree

1 file changed

+31
-0
lines changed

1 file changed

+31
-0
lines changed

long_description.rst

Lines changed: 31 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,31 @@
1+
Preprocessing of diffusion MRI (dMRI) involves numerous steps to clean and standardize
2+
the data before fitting a particular model.
3+
Generally, researchers create ad hoc preprocessing workflows for each dataset,
4+
building upon a large inventory of available tools.
5+
The complexity of these workflows has snowballed with rapid advances in
6+
acquisition and processing.
7+
dMRIPrep is an analysis-agnostic tool that addresses the challenge of robust and
8+
reproducible preprocessing for whole-brain dMRI data.
9+
dMRIPrep automatically adapts a best-in-breed workflow to the idiosyncrasies of
10+
virtually any dataset, ensuring high-quality preprocessing without manual intervention.
11+
dMRIPrep equips neuroscientists with an easy-to-use and transparent preprocessing
12+
workflow, which can help ensure the validity of inference and the interpretability
13+
of results.
14+
15+
The workflow is based on `Nipype <https://nipype.readthedocs.io>`_ and encompases a large
16+
set of tools from well-known neuroimaging packages, including
17+
`FSL <https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/>`_,
18+
`ANTs <https://stnava.github.io/ANTs/>`_,
19+
`FreeSurfer <https://surfer.nmr.mgh.harvard.edu/>`_,
20+
`AFNI <https://afni.nimh.nih.gov/>`_,
21+
and `Nilearn <https://nilearn.github.io/>`_.
22+
This pipeline was designed to provide the best software implementation for each state of
23+
preprocessing, and will be updated as newer and better neuroimaging software becomes
24+
available.
25+
26+
dMRIPrep performs basic preprocessing steps (coregistration, normalization, unwarping,
27+
segmentation, skullstripping etc.) providing outputs that can be
28+
easily submitted to a variety of tractography algorithms.
29+
30+
[Documentation `dmriprep.org <https://dmriprep.readthedocs.io>`_]
31+
[Support `neurostars.org <https://neurostars.org/tags/fmriprep>`_]

0 commit comments

Comments
 (0)