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enh: use median for robuster calculation
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dmriprep/utils/vectors.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -511,6 +511,6 @@ def b0mask_from_data(dwi_file, mask_file, z_thres=3.0):
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data = np.asanyarray(nb.load(dwi_file).dataobj)
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mask = np.asanyarray(nb.load(mask_file).dataobj) > 0.5
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signal_means = np.median(data[mask, np.newaxis], axis=0)
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zscored_means = signal_means - signal_means.mean()
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zscored_means = signal_means - np.median(signal_means)
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zscored_means /= zscored_means.std()
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return zscored_means > z_thres

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