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remove references to functional
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dmriprep/cli/parser.py

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@@ -205,7 +205,7 @@ def _bids_filter(value):
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nargs="*",
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action=OutputReferencesAction,
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help="""\
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Standard and non-standard spaces to resample anatomical and functional images to. \
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Standard and non-standard spaces to resample anatomical and diffusion images to. \
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Standard spaces may be specified by the form \
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``<SPACE>[:cohort-<label>][:res-<resolution>][...]``, where ``<SPACE>`` is \
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a keyword designating a spatial reference, and may be followed by optional, \

dmriprep/config/reports-spec.yml

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@@ -57,15 +57,15 @@ sections:
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in order to highlight potential slice Inhomogeneities and other artifacts, whereas
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the final images are resampled using cubic B-Spline interpolation.
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static: false
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subtitle: Alignment of functional and anatomical MRI data (volume based)
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subtitle: Alignment of diffusion anatomical MRI data (volume based)
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- bids: {datatype: figures, desc: bbregister, suffix: dwi}
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caption: Diffusion-weighted data and anatomical data (EPI-space and T1w-space)
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were aligned with <code>bbregister</code> (FreeSurfer).
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description: Note that nearest-neighbor interpolation is used in this reportlet
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in order to highlight potential slice Inhomogeneities and other artifacts, whereas
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the final images are resampled using cubic B-Spline interpolation.
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static: false
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subtitle: Alignment of functional and anatomical MRI data (surface driven)
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subtitle: Alignment of diffusion and anatomical MRI data (surface driven)
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- name: About
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reportlets:
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- bids: {datatype: figures, desc: about, suffix: T1w}

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