fix: workaround the mishandling of BIDS sessions by SDCFlows

oesteban · oesteban · commit bf54616bd043 · 2021-01-27T01:35:05.000-08:00
The trick is just setting ``fieldmapless=False`` as that integration is still undergoing (PR will come soon). Related: nipreps/sdcflows#180.
diff --git a/dmriprep/workflows/base.py b/dmriprep/workflows/base.py
@@ -313,6 +313,7 @@ def init_single_subject_wf(subject_id):
         fmap_estimators = find_estimators(
             layout=config.execution.layout,
             subject=subject_id,
+            fmapless=False,
         )
 
         # Add fieldmap-less estimators

Original file line number	Diff line number	Diff line change
`@@ -313,6 +313,7 @@ def init_single_subject_wf(subject_id):`
`313`	`313`	`fmap_estimators = find_estimators(`
`314`	`314`	`layout=config.execution.layout,`
`315`	`315`	`subject=subject_id,`
	`316`	`+ fmapless=False,`
`316`	`317`	`)`
`317`	`318`
`318`	`319`	`# Add fieldmap-less estimators`