Merge pull request #1128 from ZhifangYe/master

Fix bad connection for --medial-surface-nan option

Author: effigies

.zenodo.json

@@ -68,6 +68,11 @@
       "affiliation": "Department of Psychology, University of California, Berkeley",
       "orcid": "0000-0001-8012-6399"
     },
+    {
+      "name": "Ye, Zhifang",
+      "affiliation": "State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University",
+      "orcid": "0000-0003-0489-2619"
+    },
     {
       "name": "Poldrack, Russell A.",
       "affiliation": "Department of Psychology, Stanford University",

fmriprep/workflows/bold/resampling.py

@@ -151,7 +151,7 @@ def select_target(subject_id, space):
             (inputnode, medial_nans, [('subjects_dir', 'subjects_dir')]),
             (sampler, medial_nans, [('out_file', 'in_file')]),
             (targets, medial_nans, [('out', 'target_subject')]),
-            (medial_nans, merger, [('out', 'in1')]),
+            (medial_nans, merger, [('out_file', 'in1')]),
         ])
     else:
         workflow.connect(sampler, 'out_file', merger, 'in1')