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Remove c3d from Dockerfilr
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@@ -86,12 +86,6 @@ RUN mkdir /opt/workbench && \
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rm -rf /opt/workbench/libs_linux64_software_opengl /opt/workbench/plugins_linux64 && \
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strip --remove-section=.note.ABI-tag /opt/workbench/libs_linux64/libQt5Core.so.5
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# Convert3d 1.4.0
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FROM downloader AS c3d
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RUN mkdir /opt/convert3d && \
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curl -fsSL --retry 5 https://sourceforge.net/projects/c3d/files/c3d/Experimental/c3d-1.4.0-Linux-gcc64.tar.gz/download \
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| tar -xz -C /opt/convert3d --strip-components 1
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# Micromamba
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FROM downloader AS micromamba
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@@ -181,7 +175,6 @@ RUN apt-get update -qq \
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COPY --from=freesurfer /opt/freesurfer /opt/freesurfer
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COPY --from=afni /opt/afni-latest /opt/afni-latest
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COPY --from=workbench /opt/workbench /opt/workbench
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COPY --from=c3d /opt/convert3d/bin/c3d_affine_tool /usr/bin/c3d_affine_tool
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# Simulate SetUpFreeSurfer.sh
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ENV OS="Linux" \

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