Fix connections.

Author: tsalo

fmriprep/workflows/bold/base.py

@@ -531,10 +531,8 @@ def init_bold_wf(
             goodvoxels_bold_mask_wf = init_goodvoxels_bold_mask_wf(mem_gb)
 
             workflow.connect([
-                (inputnode, goodvoxels_bold_mask_wf, [
-                    ("bold_file", "inputnode.bold_file"),
-                    ("anat_ribbon", "inputnode.anat_ribbon"),
-                ]),
+                (inputnode, goodvoxels_bold_mask_wf, [("anat_ribbon", "inputnode.anat_ribbon")]),
+                (bold_anat_wf, goodvoxels_bold_mask_wf, [("bold_file", "inputnode.bold_file")]),
                 (goodvoxels_bold_mask_wf, bold_fsLR_resampling_wf, [
                     ("outputnode.goodvoxels_mask", "inputnode.volume_roi"),
                 ]),
@@ -593,7 +591,6 @@ def init_bold_wf(
                 ("midthickness_fsLR", "inputnode.midthickness_fsLR"),
                 ("sphere_reg_fsLR", "inputnode.sphere_reg_fsLR"),
                 ("cortex_mask", "inputnode.cortex_mask"),
-                ("anat_ribbon", "inputnode.anat_ribbon"),
             ]),
             (bold_anat_wf, bold_fsLR_resampling_wf, [
                 ("outputnode.bold_file", "inputnode.bold_file"),

fmriprep/workflows/bold/resampling.py

@@ -539,8 +539,6 @@ def init_bold_fsLR_resampling_wf(
     ------
     bold_file : :class:`str`
         Path to BOLD file resampled into T1 space
-    anat_ribbon : :class:`str`
-        Path to mask of cortical ribbon in T1w space, for calculating goodvoxels
     white : :class:`list` of :class:`str`
         Path to left and right hemisphere white matter GIFTI surfaces.
     pial : :class:`list` of :class:`str`
@@ -582,7 +580,6 @@ def init_bold_fsLR_resampling_wf(
         niu.IdentityInterface(
             fields=[
                 'bold_file',
-                'anat_ribbon',
                 'white',
                 'pial',
                 'midthickness',