rel(25.1.2): update changes, bump requirements

Author: mgxd

CHANGES.rst

@@ -1,3 +1,12 @@
+25.1.2 (June 17, 2025)
+======================
+Patch release in the 25.1.x series.
+
+This fixes crashes encountered processing a BIDS dataset with one or more
+``B0FieldIdentifier`` keys with non-unicode word characters.
+
+  * FIX: Use sanitized fieldmap naming (#3471)
+
 25.1.1 (May 23, 2025)
 =====================
 Patch release in the 25.1.x series.

requirements.txt

@@ -1,6 +1,6 @@
 # This file was autogenerated by uv via the following command:
 #    uv pip compile --extra=container --strip-extras pyproject.toml -o requirements.txt -p 3.12
-acres==0.3.0
+acres==0.5.0
     # via
     #   fmriprep (pyproject.toml)
     #   bidsschematools
@@ -28,17 +28,17 @@ attrs==25.3.0
     #   sdcflows
 bids-validator==1.14.7.post0
     # via pybids
-bidsschematools==1.0.8
+bidsschematools==1.0.10
     # via bids-validator
 bokeh==3.6.3
     # via tedana
-boto3==1.38.18
+boto3==1.38.38
     # via datalad
-botocore==1.38.18
+botocore==1.38.38
     # via
     #   boto3
     #   s3transfer
-certifi==2025.4.26
+certifi==2025.6.15
     # via
     #   httpcore
     #   httpx
@@ -54,26 +54,24 @@ ci-info==0.3.0
     # via
     #   etelemetry
     #   migas
-click==8.2.0
+click==8.2.1
     # via
     #   bidsschematools
     #   codecarbon
     #   nipype
     #   pybids
     #   typer
-codecarbon==3.0.1
+codecarbon==3.0.2
     # via fmriprep (pyproject.toml)
 contourpy==1.3.2
     # via
     #   bokeh
     #   matplotlib
-cryptography==45.0.2
-    # via
-    #   jwcrypto
-    #   secretstorage
+cryptography==45.0.4
+    # via jwcrypto
 cycler==0.12.1
     # via matplotlib
-datalad==1.1.6
+datalad==1.2.0
     # via
     #   fmriprep (pyproject.toml)
     #   datalad-next
@@ -94,19 +92,17 @@ fief-client==0.20.0
     # via codecarbon
 filelock==3.18.0
     # via nipype
-fonttools==4.58.0
+fonttools==4.58.4
     # via matplotlib
 formulaic==1.1.1
     # via pybids
 frozendict==2.4.6
     # via pybids
-fsspec==2025.3.2
+fsspec==2025.5.1
     # via universal-pathlib
-greenlet==3.2.2
-    # via sqlalchemy
 h11==0.16.0
     # via httpcore
-h5py==3.13.0
+h5py==3.14.0
     # via nitransforms
 httpcore==1.0.9
     # via httpx
@@ -123,14 +119,12 @@ idna==3.10
     #   requests
 imageio==2.37.0
     # via scikit-image
-indexed-gzip==1.9.4
+indexed-gzip==1.9.5
     # via smriprep
 interface-meta==1.3.0
     # via formulaic
 iso8601==2.1.0
     # via datalad
-isodate==0.6.1
-    # via rdflib
 jaraco-classes==3.4.0
     # via
     #   keyring
@@ -141,10 +135,6 @@ jaraco-context==6.0.1
     #   keyrings-alt
 jaraco-functools==4.1.0
     # via keyring
-jeepney==0.9.0
-    # via
-    #   keyring
-    #   secretstorage
 jinja2==3.1.6
     # via
     #   bokeh
@@ -153,7 +143,7 @@ jmespath==1.0.1
     # via
     #   boto3
     #   botocore
-joblib==1.5.0
+joblib==1.5.1
     # via
     #   nilearn
     #   robustica
@@ -166,7 +156,7 @@ keyrings-alt==5.0.2
     # via datalad
 kiwisolver==1.4.8
     # via matplotlib
-latexcodec==3.0.0
+latexcodec==3.0.1
     # via pybtex
 lazy-loader==0.4
     # via scikit-image
@@ -183,7 +173,6 @@ lxml==5.4.0
     # via
     #   nilearn
     #   nireports
-    #   prov
     #   svgutils
 mapca==0.0.5
     # via tedana
@@ -210,9 +199,9 @@ more-itertools==10.7.0
     #   datalad-next
     #   jaraco-classes
     #   jaraco-functools
-msgpack==1.1.0
+msgpack==1.1.1
     # via datalad
-networkx==3.4.2
+networkx==3.5
     # via
     #   nipype
     #   prov
@@ -243,18 +232,18 @@ nipype==1.10.0
     #   niworkflows
     #   sdcflows
     #   smriprep
-nireports==25.0.1
+nireports==25.2.0
     # via
     #   fmriprep (pyproject.toml)
     #   sdcflows
 nitime==0.11
     # via fmriprep (pyproject.toml)
-nitransforms==24.1.1
+nitransforms==24.1.2
     # via
     #   fmriprep (pyproject.toml)
     #   niworkflows
     #   sdcflows
-niworkflows==1.13.3
+niworkflows==1.13.4
     # via
     #   fmriprep (pyproject.toml)
     #   sdcflows
@@ -331,11 +320,11 @@ pillow==11.2.1
     #   scikit-image
 platformdirs==4.3.8
     # via datalad
-prometheus-client==0.22.0
+prometheus-client==0.22.1
     # via codecarbon
 prompt-toolkit==3.0.51
     # via questionary
-prov==2.0.1
+prov==2.0.2
     # via nipype
 psutil==7.0.0
     # via
@@ -359,12 +348,14 @@ pybtex-apa-style==1.3
     # via tedana
 pycparser==2.22
     # via cffi
-pydantic==2.11.4
+pydantic==2.11.7
     # via codecarbon
 pydantic-core==2.33.2
     # via pydantic
-pydot==4.0.0
-    # via nipype
+pydot==4.0.1
+    # via
+    #   nipype
+    #   prov
 pygments==2.19.1
     # via rich
 pynvml==12.0.0
@@ -382,7 +373,7 @@ python-dateutil==2.9.0.post0
     #   nipype
     #   pandas
     #   prov
-python-gitlab==5.6.0
+python-gitlab==6.0.0
     # via datalad
 pytz==2025.2
     # via pandas
@@ -398,11 +389,9 @@ questionary==2.1.0
     # via codecarbon
 rapidfuzz==3.13.0
     # via codecarbon
-rdflib==6.3.2
-    # via
-    #   nipype
-    #   prov
-requests==2.32.3
+rdflib==7.1.4
+    # via nipype
+requests==2.32.4
     # via
     #   fmriprep (pyproject.toml)
     #   codecarbon
@@ -421,7 +410,7 @@ rich==14.0.0
     #   typer
 robustica==0.1.4
     # via tedana
-s3transfer==0.12.0
+s3transfer==0.13.0
     # via boto3
 scikit-image==0.25.2
     # via
@@ -448,23 +437,21 @@ scipy==1.15.2
     #   scikit-learn
     #   sdcflows
     #   tedana
-sdcflows==2.13.0
+sdcflows==2.13.1
     # via fmriprep (pyproject.toml)
 seaborn==0.13.2
     # via
     #   nireports
     #   niworkflows
-secretstorage==3.3.3
-    # via keyring
-sentry-sdk==2.28.0
+    #   tedana
+sentry-sdk==2.30.0
     # via fmriprep (pyproject.toml)
 shellingham==1.5.4
     # via typer
 simplejson==3.20.1
     # via nipype
 six==1.17.0
     # via
-    #   isodate
     #   osfclient
     #   pybtex
     #   python-dateutil
@@ -478,7 +465,7 @@ sqlalchemy==2.0.41
     # via pybids
 svgutils==0.3.4
     # via niworkflows
-tedana==25.0.0
+tedana==25.0.1
     # via fmriprep (pyproject.toml)
 templateflow==24.2.2
     # via
@@ -493,13 +480,13 @@ threadpoolctl==3.6.0
     # via
     #   scikit-learn
     #   tedana
-tifffile==2025.5.10
+tifffile==2025.6.11
     # via scikit-image
 toml==0.10.2
     # via
     #   fmriprep (pyproject.toml)
     #   sdcflows
-tornado==6.5
+tornado==6.5.1
     # via bokeh
 tqdm==4.67.1
     # via
@@ -514,11 +501,11 @@ transforms3d==0.4.2
     # via
     #   fmriprep (pyproject.toml)
     #   niworkflows
-typer==0.15.3
+typer==0.16.0
     # via codecarbon
 types-python-dateutil==2.9.0.20250516
     # via arrow
-typing-extensions==4.13.2
+typing-extensions==4.14.0
     # via
     #   anyio
     #   formulaic
@@ -529,7 +516,7 @@ typing-extensions==4.13.2
     #   sqlalchemy
     #   typer
     #   typing-inspection
-typing-inspection==0.4.0
+typing-inspection==0.4.1
     # via pydantic
 tzdata==2025.2
     # via pandas