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| nibabel | https://doi.org/10.5281/zenodo.60808 | https://github.com/nipy/nibabel/ |
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| nilearn | https://doi.org/10.3389/fninf.2014.00014 | https://github.com/nilearn/nilearn/ |
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| nipype | https://doi.org/10.3389/fninf.2011.00013 https://doi.org/10.5281/zenodo.581704 | https://github.com/nipy/nipype/ |
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- | convert3d | | https://sourceforge.net/projects/c3d/ |
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| ** Graphics**
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| seaborn | https://doi.org/10.5281/zenodo.883859 | https://github.com/mwaskom/seaborn |
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| matplotlib 2.0.0 | https://doi.org/10.5281/zenodo.248351 | https://github.com/matplotlib/matplotlib |
Original file line number Diff line number Diff line change @@ -88,7 +88,6 @@ the ``fmriprep`` package:
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- FSL _ (version 6.0.7.7)
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- ANTs _ (version 2.5.1)
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- AFNI _ (version 24.0.05)
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- - `C3D <https://sourceforge.net/projects/c3d/ >`_ (version 1.4.0)
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- FreeSurfer _ (version 7.3.2)
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- `bids-validator <https://github.com/bids-standard/bids-validator >`_ (version 1.14.0)
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- `connectome-workbench <https://www.humanconnectome.org/software/connectome-workbench >`_ (version 1.5.0)
Original file line number Diff line number Diff line change @@ -31,8 +31,6 @@ dependencies:
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# Try to remove this ASAP
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# https://github.com/conda-forge/ants-feedstock/issues/19
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- libitk=5.4.0
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- # Workflow dependencies: Convert3d
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- - convert3d=1.4
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# Workflow dependencies: Connectome Workbench
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- connectome-workbench-cli=2.0
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# Workflow dependencies: FSL (versions pinned in 6.0.7.13)
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