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Merge pull request #1994 from poldracklab/rel/20.0.0rc3
REL: 20.0.0
2 parents d65cfdd + 85901a7 commit 48a952f

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.mailmap

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@@ -4,6 +4,9 @@ Alejandro de la Vega <[email protected]>
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Alejandro de la Vega <[email protected]> delavega4
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Anibal Sólon Heinsfeld <[email protected]>
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Asier Erramuzpe <[email protected]>
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Basille Pinsard <[email protected]>
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Basille Pinsard <[email protected]> basile <[email protected]>
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Christopher J. Markiewicz <[email protected]>
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Christopher J. Markiewicz <[email protected]> <[email protected]>
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Christopher J. Markiewicz <[email protected]> <[email protected]>
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Krzysztof J. Gorgolewski <[email protected]>
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Krzysztof J. Gorgolewski <[email protected]> <[email protected]>
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Krzysztof J. Gorgolewski <[email protected]> <filo@filo-dtc-laptop>
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Krzysztof J. Gorgolewski <[email protected]> <filo@filo-Precision-M6500.(none)>
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Krzysztof J. Gorgolewski <[email protected]> <filo@filo-Precision-M6500>
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Krzysztof J. Gorgolewski <[email protected]> <filo@filo-dtc-laptop>
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Krzysztof J. Gorgolewski <[email protected]> <filo@filolaptop>
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Krzysztof J. Gorgolewski <[email protected]> <[email protected]>
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@@ -35,6 +38,8 @@ Mathias Goncalves <[email protected]>
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Matteo Visconti di Oleggio Castello <[email protected]>
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Mikael Naveau <[email protected]>
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Nir Jacoby <[email protected]>
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@@ -44,12 +49,13 @@ Pablo Velasco <[email protected]>
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Rastko Ciric <[email protected]>
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Romain Valabregue <[email protected]>
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Ross Blair <[email protected]>
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Romain Valabregue <[email protected]>
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Saren Seeley <[email protected]>
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Sebastian Urchs <[email protected]>
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Sebastien Naze <[email protected]>
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Soichi Hayashi <[email protected]>
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William Hedley Thompson <[email protected]>
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William Hedley Thompson <[email protected]> <[email protected]>

.zenodo.json

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"orcid": "0000-0002-9402-2184",
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"type": "Researcher"
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},
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{
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"affiliation": "Department of Psychology, University of California, Berkeley",
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"name": "Lurie, Daniel J.",
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"orcid": "0000-0001-8012-6399",
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"type": "Researcher"
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},
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{
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"affiliation": "CENIR, INSERM U1127, CNRS UMR 7225, UPMC Univ Paris 06 UMR S 1127, Institut du Cerveau et de la Moelle \u00e9pini\u00e8re, ICM, F-75013, Paris, France",
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"name": "Valabregue, Romain",
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"orcid": "0000-0001-7936-9991",
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"type": "Researcher"
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},
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{
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"affiliation": "Department of Psychology, University of California, Berkeley",
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"name": "Lurie, Daniel J.",
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"orcid": "0000-0001-8012-6399",
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"type": "Researcher"
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},
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{
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"affiliation": "Child Mind Institute",
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"name": "Heinsfeld, Anibal S.",
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"name": "DuPre, Elizabeth",
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"orcid": "0000-0003-1358-196X"
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},
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{
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"affiliation": "Neuroscience Program, University of Iowa",
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"name": "Kent, James D.",
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"orcid": "0000-0002-4892-2659"
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},
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{
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"affiliation": "Department of Psychology, Stanford University",
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"name": "Goncalves, Mathias",
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"orcid": "0000-0002-7252-7771"
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},
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{
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"affiliation": "Neuroscience Program, University of Iowa",
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"name": "Kent, James D.",
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"orcid": "0000-0002-4892-2659"
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},
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{
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"affiliation": "Department of Psychology, Stanford University",
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"name": "Ciric, Rastko",

CHANGES.rst

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@@ -29,11 +29,54 @@ This release includes contributions from Azeez Adebimpe and Basile Pinsard - ver
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* ENH: Add ``--bids-filter-file`` argument for more controlled data querying (#1770)
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* FIX: Ensure subject ID is used when selecting BIDS data (#1982)
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* FIX: Display a log message when processing completes successfully (#1977)
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* DOC: Clean up surface outputs (#1993)
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* DOC: Integrate intersphinx, drop external module wrapping (#1989)
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* DOC: Improve custom template usage description (#1969)
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* MAINT: Use local docker registry (#1990)
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* MAINT: Pin connectome-workbench 1.3.2, add to documented dependencies (#1958)
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* MAINT: Pin NiBabel, NiWorkflows, sMRIPrep (#1971)
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* MAINT: CI build error fixes (#1976)
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.. admonition:: Author list for papers based on *fMRIPrep* v20.0.0
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As described in the `Contributor Guidelines
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<https://github.com/poldracklab/fmriprep/blob/d65cfdd80443c5ca779680b1087d14f189e8ceb5/CONTRIBUTING.md#publications>`__, anyone
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listed as developer or contributor may write and submit manuscripts regarding
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*fMRIPrep*.
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To do so, please move the author(s) name(s) to the front of the following list.
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Markiewicz, Christopher J. (1); DuPre, Elizabeth (2); Goncalves, Mathias (1); Kent, James D. (3); Ciric, Rastko (1); Salo, Taylor (4); de la Vega, Alejandro (5); Finc, Karolina (6); Feingold, Franklin (1); Urchs, Sebastian (2); Blair, Ross W. (1); Erramuzpe, Asier (7); Valabregue, Romain (8); Jacoby, Nir (9); Lurie, Daniel J. (10); Heinsfeld, Anibal S. (11); Halchenko, Yaroslav O. (12); Sneve, Markus H. (13); Devenyi, Grabriel A. (14); Liem, Franz (15); Gomez, Daniel E. P. (16); Adebimpe, Azeez (17); Velasco, Pablo (18); Groen, Iris I. A. (19); Ma, Feilong (12); Rivera-Dompenciel, Adriana (3); Amlien, Inge K. (13); Cieslak, Matthew (17); Ghosh, Satrajit S. (20, 21); Isik, Ayse Ilkay (22); Moodie, Craig A. (1); Naveau, Mikaël (23); Satterthwaite, Theodore D. (17); Sitek, Kevin R. (24); Stojić, Hrvoje (25); Thompson, William H (1); Tooley, Ursula A. (26); Wright, Jessey (1); Ye, Zhifang (27); Gorgolewski, Krzysztof J. (1); Poldrack, Russell A. (1); Esteban, Oscar (1)
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Affiliations:
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1. Department of Psychology, Stanford University
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2. Montreal Neurological Institute, McGill University
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3. Neuroscience Program, University of Iowa
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4. Department of Psychology, Florida International University
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5. University of Texas at Austin
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6. Centre for Modern Interdisciplinary Technologies, Nicolaus Copernicus University in Toruń
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7. Computational Neuroimaging Lab, BioCruces Health Research Institute
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8. CENIR, INSERM U1127, CNRS UMR 7225, UPMC Univ Paris 06 UMR S 1127, Institut du Cerveau et de la Moelle épinière, ICM, F-75013, Paris, France
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9. Department of Psychology, Columbia University
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10. Department of Psychology, University of California, Berkeley
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11. Child Mind Institute
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12. Dartmouth College: Hanover, NH, United States
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13. Center for Lifespan Changes in Brain and Cognition, University of Oslo
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14. Department of Psychiatry, McGill University
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15. URPP Dynamics of Healthy Aging, University of Zurich
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16. Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen
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17. Perelman School of Medicine, University of Pennsylvania, PA, USA
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18. Center for Brain Imaging, New York University
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19. Department of Psychology, New York University, NY, USA
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20. McGovern Institute for Brain Research, MIT, MA, USA
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21. Department of Otolaryngology, Harvard Medical School, MA, USA
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22. Max Planck Institute for Empirical Aesthetics
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23. Cyceron, UMS 3408 (CNRS - UCBN), France
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24. Speech & Hearing Bioscience & Technology Program, Harvard University
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25. Max Planck UCL Centre for Computational Psychiatry and Ageing Research, University College London
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26. Department of Neuroscience, University of Pennsylvania, PA, USA
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27. State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University
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1.5.9 (February 14, 2020)
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=========================
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Bug-fix release in the 1.5.x series.

setup.cfg

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[options]
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python_requires = >=3.5
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install_requires =
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indexed_gzip >= 0.8.8
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nibabel >= 3.0.1
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nipype >=1.3.1
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nipype >= 1.3.1
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nitime
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niworkflows ~= 1.1.7
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numpy
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pandas
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psutil >=5.4
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pybids ~= 0.9.4
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psutil >= 5.4
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pybids >= 0.9.4
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pyyaml
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sdcflows ~= 1.2.0
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smriprep ~= 0.5.2
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tedana >=0.0.5
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templateflow ~= 0.4.2rc1
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tedana >= 0.0.5
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templateflow >= 0.4.2
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test_requires =
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coverage
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codecov

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