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edits to fmri-docker (2)
applying suggestions and recommendations from Chris M
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docs/installation.rst

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@@ -26,8 +26,9 @@ In order to run fmriprep in a Docker container, Docker must be `installed
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<https://docs.docker.com/engine/installation/>`_.
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Once Docker is installed, the recommended way to run fmriprep is to use the
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fmriprep-docker_ wrapper, which requires Python and an Internet connection.
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``fmriprep-docker`` is a streamlined command to run fmriprep without having to
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properly mount directories (``fmriprep-docker`` does this for you).
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``fmriprep-docker`` is a command that allows you to write your command line
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as if you were running ``fmriprep`` directly, converts it into a ``docker``
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command.
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To install::
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@@ -43,10 +44,8 @@ needed, e.g.::
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/data /out participant
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...
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For ``fmriprep-docker`` all the arguments you would typically pass to fmriprep,
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you can use for ``fmriprep-docker`` (i.e. ignoring slice time corrections).
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Additionally, ``fmriprep-docker`` handles mounting the paths and environmental
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variables automatically.
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``fmriprep-docker`` accepts all of the typical options for ``fmriprep``,
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automatically translating directories into Docker mount points.
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We have published a `step-by-step tutorial
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<http://reproducibility.stanford.edu/fmriprep-tutorial-running-the-docker-image/>`_

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