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1 parent f222254 commit 5e7b035Copy full SHA for 5e7b035
docs/workflows.rst
@@ -19,7 +19,10 @@ is presented below:
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:simple_form: yes
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from fmriprep.workflows.base import init_single_subject_wf
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+ from collections import namedtuple
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+ BIDSLayout = namedtuple('BIDSLayout', ['root'], defaults='.')
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wf = init_single_subject_wf(
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+ layout=BIDSLayout(),
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subject_id='test',
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name='single_subject_wf',
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task_id='',
@@ -30,7 +33,6 @@ is presented below:
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freesurfer=True,
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reportlets_dir='.',
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output_dir='.',
- bids_dir='.',
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skull_strip_template='OASIS30ANTs',
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skull_strip_fixed_seed=False,
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template='MNI152NLin2009cAsym',
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