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102 | 102 | "name": "epi_mean_t1_registration/flirt",
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103 | 103 | "file_pattern": "func/.*_bold_flirt",
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104 | 104 | "title": "EPI to T1 registration",
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105 |
| - "description": "FLIRT was used to generate transformations from EPI space to T1 Space - BBR refinement rejected" |
| 105 | + "description": "FSL <code>flirt</code> was used to generate transformations from EPI space to T1 Space - BBR refinement rejected" |
106 | 106 | },
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107 | 107 | {
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108 | 108 | "name": "epi_mean_t1_registration/coreg",
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109 | 109 | "file_pattern": "func/.*_bold_coreg",
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110 | 110 | "title": "EPI to T1 registration",
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111 |
| - "description": "mri_coreg (FreeSurfer) was used to generate transformations from EPI space to T1 Space - bbregister refinement rejected" |
| 111 | + "description": "<code>mri_coreg</code> (FreeSurfer) was used to generate transformations from EPI space to T1 Space - <code>bbregister</code> refinement rejected" |
112 | 112 | },
|
113 | 113 | {
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114 | 114 | "name": "epi_mean_t1_registration/flt_bbr",
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115 | 115 | "file_pattern": "func/.*_bold_flt_bbr",
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116 | 116 | "title": "EPI to T1 registration",
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117 |
| - "description": "FLIRT was used to generate transformations from EPI space to T1 Space - FAST segmentation used for BBR" |
| 117 | + "description": "FSL <code>flirt</code> was used to generate transformations from EPI-space to T1w-space - The white matter mask calculated with FSL <code>fast</code> (brain tissue segmentation) was used for BBR" |
118 | 118 | },
|
119 | 119 | {
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120 | 120 | "name": "epi_mean_t1_registration/bbr",
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121 | 121 | "file_pattern": "func/.*_bold_bbr",
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122 | 122 | "title": "EPI to T1 registration",
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123 |
| - "description": "bbregister was used to generate transformations from EPI space to T1 Space" |
| 123 | + "description": "<code>bbregister</code> was used to generate transformations from EPI-space to T1w-space" |
124 | 124 | },
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125 | 125 | {
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126 | 126 | "name": "ica_aroma",
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127 | 127 | "file_pattern": "func/.*ica_aroma",
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128 | 128 | "title": "ICA AROMA",
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129 |
| - "description": "Maps created with maximum intensity projection (glass brain) with a black brain outline. Right hand side of each map: time series (top in seconds), frequency spectrum (bottom in Hertz). Components classified as signal in green; noise in red." |
| 129 | + "description": "Maps created with maximum intensity projection (glass brain) with a black brain outline. Right hand side of each map: time series (top in seconds), frequency spectrum (bottom in Hertz). Components classified as signal are plotted in green; noise components in red." |
130 | 130 | }
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131 | 131 | ]
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132 | 132 | },
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