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[HOTFIX] Reportlets - bbregister vs flirtbbr (continues #1326)
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fmriprep/viz/config.json

Lines changed: 4 additions & 4 deletions
Original file line numberDiff line numberDiff line change
@@ -111,14 +111,14 @@
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"description": "<code>mri_coreg</code> (FreeSurfer) was used to generate transformations from EPI space to T1 Space - <code>bbregister</code> refinement rejected"
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},
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{
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"name": "epi_mean_t1_registration/flt_bbr",
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"file_pattern": "func/.*_flt_bbr",
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"name": "epi_mean_t1_registration/flirtbbr",
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"file_pattern": "func/.*_flirtbbr",
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"title": "EPI to T1 registration",
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"description": "FSL <code>flirt</code> was used to generate transformations from EPI-space to T1w-space - The white matter mask calculated with FSL <code>fast</code> (brain tissue segmentation) was used for BBR"
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},
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{
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"name": "epi_mean_t1_registration/bbr",
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"file_pattern": "func/.*_bbr",
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"name": "epi_mean_t1_registration/bbregister",
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"file_pattern": "func/.*_bbregister",
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"title": "EPI to T1 registration",
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"description": "<code>bbregister</code> was used to generate transformations from EPI-space to T1w-space"
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},

fmriprep/workflows/bold/registration.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -158,7 +158,7 @@ def init_bold_reg_wf(freesurfer, use_bbr, bold2t1w_dof, mem_gb, omp_nthreads,
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def _bold_reg_suffix(fallback, freesurfer):
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if fallback:
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return 'coreg' if freesurfer else 'flirt'
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return 'bbr' if freesurfer else 'flt_bbr'
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return 'bbregister' if freesurfer else 'flirtbbr'
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workflow.connect([
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(bbr_wf, ds_report_reg, [

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