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lines changed Original file line number Diff line number Diff line change 1717from nipype .pipeline import engine as pe
1818from nipype .interfaces import utility as niu
1919
20- from niworkflows .utils .misc import select_first
20+ from niworkflows .utils .connections import pop_file
2121
2222from ...utils .meepi import combine_meepi_source
2323
@@ -153,7 +153,7 @@ def init_func_preproc_wf(bold_file):
153153 output_dir = str (config .execution .output_dir )
154154
155155 # Extract BIDS entities and metadata from bold reference file
156- ref_file = select_first (bold_file )
156+ ref_file = pop_file (bold_file )
157157 layout = config .execution .layout
158158 entities = layout .parse_file_entities (ref_file )
159159 metadata = layout .get_metadata (ref_file )
Original file line number Diff line number Diff line change @@ -27,7 +27,7 @@ install_requires =
2727 nipype >= 1.5
2828 nitime
2929 nitransforms >= 20.0.0rc3,<20.2
30- niworkflows @ git+https://github.com/tsalo/niworkflows.git@9d78796373163d2881f80407ff9d5aee9c65f77e
30+ niworkflows @ git+https://github.com/tsalo/niworkflows.git@6fe250cb8db9b79672ba9d28a4adb15fc83e2f0f
3131 numpy
3232 pandas
3333 psutil >= 5.4
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