Merge pull request #1446 from hstojic/hstojic-bib-logs

effigies · web-flow · commit ddffc4b30470 · 2018-12-14T16:48:15.000-05:00
[ENH] Copy BibTeX file to log directory for LaTeX users
diff --git a/.circleci/ds005_outputs.txt b/.circleci/ds005_outputs.txt
@@ -1,6 +1,7 @@
 fmriprep
 fmriprep/dataset_description.json
 fmriprep/logs
+fmriprep/logs/CITATION.bib
 fmriprep/logs/CITATION.html
 fmriprep/logs/CITATION.md
 fmriprep/logs/CITATION.tex
diff --git a/.circleci/ds005_partial_outputs.txt b/.circleci/ds005_partial_outputs.txt
@@ -1,6 +1,7 @@
 fmriprep
 fmriprep/dataset_description.json
 fmriprep/logs
+fmriprep/logs/CITATION.bib
 fmriprep/logs/CITATION.html
 fmriprep/logs/CITATION.md
 fmriprep/logs/CITATION.tex
diff --git a/.circleci/ds054_outputs.txt b/.circleci/ds054_outputs.txt
@@ -1,6 +1,7 @@
 fmriprep
 fmriprep/dataset_description.json
 fmriprep/logs
+fmriprep/logs/CITATION.bib
 fmriprep/logs/CITATION.html
 fmriprep/logs/CITATION.md
 fmriprep/logs/CITATION.tex
diff --git a/.circleci/ds210_outputs.txt b/.circleci/ds210_outputs.txt
@@ -1,6 +1,7 @@
 fmriprep
 fmriprep/dataset_description.json
 fmriprep/logs
+fmriprep/logs/CITATION.bib
 fmriprep/logs/CITATION.html
 fmriprep/logs/CITATION.md
 fmriprep/logs/CITATION.tex
diff --git a/.zenodo.json b/.zenodo.json
@@ -98,6 +98,11 @@
       "affiliation": "Department of Psychology, Columbia University",
       "orcid": "0000-0001-7936-9991"
     },
+    {
+      "name": "Stojic, Hrvoje",
+      "affiliation": "University College London",
+      "orcid": "0000-0002-9699-9052"
+    },
     {
       "name": "Poldrack, Russell A.",
       "affiliation": "Department of Psychology, Stanford University",
diff --git a/fmriprep/cli/run.py b/fmriprep/cli/run.py
@@ -550,6 +550,7 @@ def build_workflow(opts, retval):
     """
     from subprocess import check_call, CalledProcessError, TimeoutExpired
     from pkg_resources import resource_filename as pkgrf
+    from shutil import copyfile
 
     from nipype import logging, config as ncfg
     from ..__about__ import __version__
@@ -764,6 +765,7 @@ def build_workflow(opts, retval):
            '-o', str(logs_path / 'CITATION.tex')]
     try:
         check_call(cmd, timeout=10)
+        copyfile(pkgrf('fmriprep', 'data/boilerplate.bib'), str(logs_path / 'CITATION.bib'))
     except (FileNotFoundError, CalledProcessError, TimeoutExpired):
         logger.warning('Could not generate CITATION.tex file:\n%s',
                        ' '.join(cmd))
