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lines changed Original file line number Diff line number Diff line change @@ -222,7 +222,7 @@ def init_func_preproc_wf(bold_file):
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config .loggers .workflow .warning (
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"No multiecho BOLD images found for T2* coregistration. "
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"Using standard EPI-T1 coregistration." )
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- t2s_coreg = False
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+ config . workflow . t2s_coreg = False
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# By default, force-bbr for t2s_coreg unless user specifies otherwise
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if config .workflow .t2s_coreg and config .workflow .use_bbr is None :
@@ -410,7 +410,7 @@ def init_func_preproc_wf(bold_file):
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bold_t2s_wf = init_bold_t2s_wf (echo_times = tes ,
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mem_gb = mem_gb ['resampled' ],
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omp_nthreads = omp_nthreads ,
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- t2s_coreg = t2s_coreg ,
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+ t2s_coreg = config . workflow . t2s_coreg ,
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name = 'bold_t2smap_wf' )
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workflow .connect ([
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