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Merge branch 'fix/docker-wrapper-home' into enh/new-reports
2 parents 056f641 + e597e42 commit fda1785

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+8
-3
lines changed

3 files changed

+8
-3
lines changed

.circleci/config.yml

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@@ -305,7 +305,7 @@ jobs:
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command: |
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cd /home/circleci/src/fmriprep
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if [[ "$( git log --format=oneline -n 1 $CIRCLE_SHA1 | grep -i -E '\[skip[ _]?docs\]' )" != "" ]]; then
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echo "Skipping pytest job"
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echo "Skipping doc building job"
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circleci step halt
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fi
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.zenodo.json

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@@ -111,6 +111,11 @@
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"affiliation": "Dartmouth College: Hanover, NH, United States",
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"orcid": "0000-0003-3456-2493"
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},
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{
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"name": "Rivera-Dompenciel, Adriana",
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"affiliation": "Neuroscience Program, University of Iowa",
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"orcid": "0000-0002-3339-4857"
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},
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{
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"name": "Poldrack, Russell A.",
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"affiliation": "Department of Psychology, Stanford University",

wrapper/fmriprep_docker.py

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@@ -396,8 +396,8 @@ def main():
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unknown_args.extend(['-w', '/scratch'])
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if opts.config:
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command.extend(['-v', ':'.join((opts.config,
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'/root/.nipype/nipype.cfg', 'ro'))])
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command.extend(['-v', ':'.join((
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opts.config, '/home/fmriprep/.nipype/nipype.cfg', 'ro'))])
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if opts.use_plugin:
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command.extend(['-v', ':'.join((opts.use_plugin, '/tmp/plugin.yml',

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