diff --git a/.zenodo.json b/.zenodo.json index b1c31a81b..980df7e6f 100644 --- a/.zenodo.json +++ b/.zenodo.json @@ -83,6 +83,11 @@ "affiliation": "Department of Psychology, University of Oslo", "orcid": "0000-0002-8508-9088" }, + { + "name": "Liem, Franz", + "affiliation": "University of Zurich", + "orcid": "0000-0003-0646-4810" + }, { "name": "Poldrack, Russell A.", "affiliation": "Department of Psychology, Stanford University", diff --git a/fmriprep/__about__.py b/fmriprep/__about__.py index 81590f460..6d6139f18 100644 --- a/fmriprep/__about__.py +++ b/fmriprep/__about__.py @@ -97,7 +97,7 @@ 'grabbit==0.2.3', 'pybids==0.6.5', 'nitime', - 'nipype>=1.1.3', + 'nipype>=1.1.4', 'niworkflows==0.4.4', 'statsmodels', 'seaborn', diff --git a/fmriprep/workflows/bold/stc.py b/fmriprep/workflows/bold/stc.py index 7a39cea02..f9b953949 100644 --- a/fmriprep/workflows/bold/stc.py +++ b/fmriprep/workflows/bold/stc.py @@ -69,7 +69,8 @@ def init_bold_stc_wf(metadata, name='bold_stc_wf'): slice_timing_correction = pe.Node( afni.TShift(outputtype='NIFTI_GZ', tr='{}s'.format(metadata["RepetitionTime"]), - slice_timing=metadata['SliceTiming']), + slice_timing=metadata['SliceTiming'], + slice_encoding_direction=metadata.get('SliceEncodingDirection', 'k')), name='slice_timing_correction') copy_xform = pe.Node(CopyXForm(), name='copy_xform', mem_gb=0.1)