@@ -214,8 +214,6 @@ jobs:
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- run :
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name : Get intermediate transforms
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command : |
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- mkdir -p /tmp/pooch
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- cd /tmp/pooch
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# Caching intermediate templates so no need to constantly fetch
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XFM="from-MNI152NLin6Asym_to-MNIInfant+1_xfm.h5"
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echo "Downloading $XFM"
@@ -229,7 +227,6 @@ jobs:
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paths :
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- fslicense
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- bcp/nipype.cfg
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- - pooch/*
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test_pytest :
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!!merge <<: *machine_defaults
@@ -348,8 +345,7 @@ jobs:
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--nthreads 4 -vv --age-months 2 --sloppy \
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--surface-recon-method infantfs \
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--derivatives precomputed=/tmp/data/${DATASET}/derivatives/bibsnet \
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- --output-layout bids --anat-only \
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- --pooch-cache-dir /tmp/pooch
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+ --output-layout bids --anat-only
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- run :
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name : Checking outputs of anatomical nibabies run
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command : |
@@ -378,8 +374,7 @@ jobs:
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--nthreads 4 -vv --age-months 2 \
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--surface-recon-method infantfs \
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--derivatives precomputed=/tmp/data/${DATASET}/derivatives/bibsnet \
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- --output-layout bids \
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- --pooch-cache-dir /tmp/pooch
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+ --output-layout bids
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- run :
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name : Checking outputs of full nibabies run
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command : |
@@ -425,8 +420,7 @@ jobs:
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--nthreads 4 -vv --age-months 2 \
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--surface-recon-method infantfs \
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--derivatives precomputed=/tmp/data/${DATASET}-t2only/derivatives/bibsnet \
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- --output-layout bids --anat-only --cifti-output \
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- --pooch-cache-dir /tmp/pooch
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+ --output-layout bids --anat-only --cifti-output
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- run :
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name : Checking outputs of T2-only nibabies anat
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command : |
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