@@ -420,7 +420,6 @@ def init_func_preproc_wf(bold_file, has_fieldmap=False, existing_derivatives=Non
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cifti_output = config .workflow .cifti_output ,
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freesurfer = freesurfer ,
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project_goodvoxels = config .workflow .project_goodvoxels ,
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- project_goodvoxels = config .workflow .project_goodvoxels ,
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all_metadata = all_metadata ,
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multiecho = multiecho ,
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output_dir = nibabies_dir ,
@@ -923,7 +922,6 @@ def init_func_preproc_wf(bold_file, has_fieldmap=False, existing_derivatives=Non
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surface_spaces = freesurfer_spaces ,
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medial_surface_nan = config .workflow .medial_surface_nan ,
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project_goodvoxels = config .workflow .project_goodvoxels ,
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- project_goodvoxels = config .workflow .project_goodvoxels ,
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name = "bold_surf_wf" ,
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)
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# fmt:off
@@ -934,17 +932,12 @@ def init_func_preproc_wf(bold_file, has_fieldmap=False, existing_derivatives=Non
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('t1w2fsnative_xfm' , 'inputnode.t1w2fsnative_xfm' ),
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("anat_ribbon" , "inputnode.anat_ribbon" ),
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("anat_mask" , "inputnode.t1w_mask" )]),
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- ('t1w2fsnative_xfm' , 'inputnode.t1w2fsnative_xfm' ),
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- ("anat_ribbon" , "inputnode.anat_ribbon" ),
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- ("anat_mask" , "inputnode.t1w_mask" )]),
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(bold_t1_trans_wf , bold_surf_wf , [('outputnode.bold_t1' , 'inputnode.source_file' )]),
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(bold_surf_wf , outputnode , [('outputnode.surfaces' , 'surfaces' )]),
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(bold_surf_wf , func_derivatives_wf , [
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('outputnode.target' , 'inputnode.surf_refs' )]),
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(bold_surf_wf , func_derivatives_wf , [("outputnode.goodvoxels_ribbon" ,
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"inputnode.goodvoxels_ribbon" )]),
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- (bold_surf_wf , func_derivatives_wf , [("outputnode.goodvoxels_ribbon" ,
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- "inputnode.goodvoxels_ribbon" )]),
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])
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# fmt:on
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