@@ -247,7 +247,7 @@ def init_anat_reports_wf(
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# fmt: off
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workflow .connect ([
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(inputnode , recon_report , [('subjects_dir' , 'subjects_dir' ),
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- ('subject_id' , 'subject_id' )]),
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+ ('subject_id' , 'subject_id' )]),
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(recon_report , ds_recon_report , [('out_report' , 'in_file' )]),
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(inputnode , ds_recon_report , [('source_file' , 'source_file' )])
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])
@@ -654,7 +654,7 @@ def init_anat_derivatives_wf(
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# fmt: off
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workflow .connect ([
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(inputnode , mask_anat , [(preproc_file , 'in_file' ),
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- ('anat_mask' , 'in_mask' )]),
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+ ('anat_mask' , 'in_mask' )]),
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(mask_anat , anat2std_t1w , [('out_file' , 'input_image' )]),
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(inputnode , anat2std_mask , [('anat_mask' , 'input_image' )]),
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(inputnode , anat2std_dseg , [('anat_dseg' , 'input_image' )]),
@@ -832,9 +832,9 @@ def init_anat_derivatives_wf(
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(name_morphs , ds_morphs , [('hemi' , 'hemi' ),
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('suffix' , 'suffix' )]),
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(inputnode , ds_anat_fsaseg , [('anat_fs_aseg' , 'in_file' ),
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- (source_files , 'source_file' )]),
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+ (source_files , 'source_file' )]),
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(inputnode , ds_anat_fsparc , [('anat_fs_aparc' , 'in_file' ),
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- (source_files , 'source_file' )]),
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+ (source_files , 'source_file' )]),
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])
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# fmt: on
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if cifti_output :
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