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lines changed Original file line number Diff line number Diff line change @@ -93,10 +93,10 @@ def init_infant_anat_wf(
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init_anat_reports_wf ,
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init_coreg_report_wf ,
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)
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- from .preproc import init_anat_average_wf
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from .registration import init_coregistration_wf
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from .segmentation import init_anat_segmentations_wf
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from .surfaces import init_anat_ribbon_wf
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+ from .template import init_anat_template_wf
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# for now, T1w only
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num_t1w = len (t1w ) if t1w else 0
@@ -201,17 +201,21 @@ def init_infant_anat_wf(
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)
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# Multiple T1w files -> generate average reference
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- t1w_template_wf = init_anat_average_wf (
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+ t1w_template_wf = init_anat_template_wf (
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+ contrast = "T1w" ,
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+ num_files = num_t1w ,
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longitudinal = longitudinal ,
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omp_nthreads = omp_nthreads ,
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- num_maps = num_t1w ,
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+ sloppy = sloppy ,
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name = "t1w_template_wf" ,
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)
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- t2w_template_wf = init_anat_average_wf (
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+ t2w_template_wf = init_anat_template_wf (
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+ contrast = "T2w" ,
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+ num_files = num_t2w ,
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longitudinal = longitudinal ,
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omp_nthreads = omp_nthreads ,
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- num_maps = num_t2w ,
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+ sloppy = sloppy ,
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name = "t2w_template_wf" ,
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)
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