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What happened?
Hello!
This may not necessarily be a bug report, but when running Nibabies with pepolar fieldmaps paired to my BOLD runs, I run into an error:
"ValueError: Reference passed is not aligned with spline grids"
What could be happening here? The fieldmaps look fine -- I received the same error on another session as well (I can paste that log output here as well if needed)
What command did you use?
docker run --rm -it -u 2539:946 -v /usr/local/pkg/freesurfer7.3/.license:/opt/freesurfer/license.txt:ro -v /data/sylvester/data1/datasets/turing/rawdata:/data:ro -v /data/sylvester/data1/datasets/turing/derivatives/nibabies:/out -v /export/scratch1/turing_work/sub-Turing10_ses-01:/work -v /data/sylvester/data1/datasets/turing/derivatives/bibsnet:/deriv1 nipreps/nibabies:25.0.1 /data /out participant --participant-label Turing10 --session-id 01 -w /work --verbose --derivatives /deriv1 --fd-spike-threshold 0.9 --project-goodvoxels --cifti-output 91k --age-months 1 --surface-recon-method mcribs --multi-step-reg --norm-csf --output-spaces fsLR MNI152NLin2009cAsym MNI152NLin6Asym MNIInfant:cohort-1 anat --write-graph
What version of NiBabies are you using?
25.0.1
Relevant log output
Github said my log output had too many characters, so I couldn't post that here... I'm not sure what context would be useful so I've attached the full log to this issue
Add any additional information or context about the problem here.
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bugSomething isn't workingSomething isn't working