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STY: Use two spaces for indentation in pyproject.toml consistently
Use two spaces for indentation in `pyproject.toml` consistently.
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pyproject.toml

Lines changed: 68 additions & 68 deletions
Original file line numberDiff line numberDiff line change
@@ -9,29 +9,29 @@ description = "A flexible framework for volume-to-volume artifact estimation and
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readme = "README.rst"
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authors = [{name = "The NiPreps Developers", email = "[email protected]"}]
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classifiers = [
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"Development Status :: 3 - Alpha",
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"Intended Audience :: Science/Research",
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"Topic :: Scientific/Engineering :: Image Recognition",
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"License :: OSI Approved :: Apache Software License",
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"Programming Language :: Python :: 3.10",
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"Programming Language :: Python :: 3.11",
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"Programming Language :: Python :: 3.12",
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"Development Status :: 3 - Alpha",
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"Intended Audience :: Science/Research",
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"Topic :: Scientific/Engineering :: Image Recognition",
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"License :: OSI Approved :: Apache Software License",
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"Programming Language :: Python :: 3.10",
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"Programming Language :: Python :: 3.11",
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"Programming Language :: Python :: 3.12",
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]
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license = "Apache-2.0"
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requires-python = ">=3.10"
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dependencies = [
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"attrs",
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"dipy>=1.5.0",
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"joblib",
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"nipype>= 1.5.1,<2.0",
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"nitransforms>=22.0.0,<24",
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"nireports",
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"numpy>=1.21.3",
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"nest-asyncio>=1.5.1",
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"scikit-image>=0.15.0",
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"scikit_learn>=1.3.0",
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"scipy>=1.8.0",
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"typing_extensions >=4.12",
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"attrs",
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"dipy>=1.5.0",
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"joblib",
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"nipype>= 1.5.1,<2.0",
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"nitransforms>=22.0.0,<24",
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"nireports",
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"numpy>=1.21.3",
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"nest-asyncio>=1.5.1",
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"scikit-image>=0.15.0",
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"scikit_learn>=1.3.0",
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"scipy>=1.8.0",
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"typing_extensions >=4.12",
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]
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dynamic = ["version"]
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@@ -42,37 +42,37 @@ NiPreps = "https://www.nipreps.org/"
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[project.optional-dependencies]
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doc = [
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"attrs >= 20.1.0",
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"furo >= 2024.01.29",
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"matplotlib >= 2.2.0",
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"nbsphinx",
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"packaging",
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"pydot >= 1.2.3",
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"pydotplus",
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"sphinx >= 4.5, <8",
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"sphinx-argparse",
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"sphinx_rtd_theme",
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"sphinxcontrib-apidoc",
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"sphinxcontrib-napoleon",
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"sphinxcontrib-versioning",
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"sphinx-argparse",
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"sphinxcontrib-bibtex",
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"attrs >= 20.1.0",
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"furo >= 2024.01.29",
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"matplotlib >= 2.2.0",
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"nbsphinx",
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"packaging",
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"pydot >= 1.2.3",
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"pydotplus",
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"sphinx >= 4.5, <8",
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"sphinx-argparse",
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"sphinx_rtd_theme",
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"sphinxcontrib-apidoc",
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"sphinxcontrib-napoleon",
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"sphinxcontrib-versioning",
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"sphinx-argparse",
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"sphinxcontrib-bibtex",
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]
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dev = [
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"ruff",
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"pre-commit",
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"pre-commit-hooks",
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"ruff",
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"pre-commit",
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"pre-commit-hooks",
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]
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plotting = ["nilearn"]
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resmon = ["psutil >=5.4"]
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test = [
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"coverage",
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"ipykernel",
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"mriqc-learn",
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"pytest >= 4.4",
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"pytest-cov",
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"pytest-env",
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"pytest-xdist >= 1.28"
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"coverage",
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"ipykernel",
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"mriqc-learn",
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"pytest >= 4.4",
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"pytest-cov",
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"pytest-env",
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"pytest-xdist >= 1.28"
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]
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types = [
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"pandas-stubs",
@@ -84,22 +84,22 @@ types = [
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"pytest",
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]
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notebooks = [
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"jupyter",
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"nbclient",
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"nbmake",
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"mriqc_learn",
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"nipreps-synthstrip",
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"jupyter",
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"nbclient",
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"nbmake",
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"mriqc_learn",
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"nipreps-synthstrip",
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]
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antsopt = [
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"ConfigSpace",
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"nipreps",
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"scikit-image",
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"smac",
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"ConfigSpace",
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"nipreps",
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"scikit-image",
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"smac",
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]
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benchmark = [
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"asv",
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"pyperf",
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"virtualenv==20.30",
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"asv",
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"pyperf",
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"virtualenv==20.30",
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]
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# Aliases
@@ -211,10 +211,10 @@ addopts = "-v --doctest-modules"
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doctest_optionflags = "ALLOW_UNICODE NORMALIZE_WHITESPACE ELLIPSIS"
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env = "PYTHONHASHSEED=0"
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markers = [
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"random_gtab_data: Custom marker for random gtab data tests",
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"random_dwi_data: Custom marker for random dwi data tests",
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"random_uniform_ndim_data: Custom marker for random multi-dimensional data tests",
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"random_uniform_spatial_data: Custom marker for random spatial data tests",
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"random_gtab_data: Custom marker for random gtab data tests",
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"random_dwi_data: Custom marker for random dwi data tests",
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"random_uniform_ndim_data: Custom marker for random multi-dimensional data tests",
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"random_uniform_spatial_data: Custom marker for random spatial data tests",
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]
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filterwarnings = [
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"ignore::DeprecationWarning",
@@ -229,19 +229,19 @@ branch = true
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parallel = true
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concurrency = ['multiprocessing']
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omit = [
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'*/tests/*',
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'*/testing/*',
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'*/viz/*',
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'*/__init__.py',
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'*/conftest.py',
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'src/nifreeze/_version.py'
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'*/tests/*',
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'*/testing/*',
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'*/viz/*',
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'*/__init__.py',
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'*/conftest.py',
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'src/nifreeze/_version.py'
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]
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[tool.coverage.report]
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# Regexes for lines to exclude from consideration
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exclude_lines = [
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'raise NotImplementedError',
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'warnings\.warn',
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'raise NotImplementedError',
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'warnings\.warn',
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]
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[tool.codespell]

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