@@ -9,29 +9,29 @@ description = "A flexible framework for volume-to-volume artifact estimation and
99readme = " README.rst"
1010authors = [{
name =
" The NiPreps Developers" ,
email =
" [email protected] " }]
1111classifiers = [
12- " Development Status :: 3 - Alpha" ,
13- " Intended Audience :: Science/Research" ,
14- " Topic :: Scientific/Engineering :: Image Recognition" ,
15- " License :: OSI Approved :: Apache Software License" ,
16- " Programming Language :: Python :: 3.10" ,
17- " Programming Language :: Python :: 3.11" ,
18- " Programming Language :: Python :: 3.12" ,
12+ " Development Status :: 3 - Alpha" ,
13+ " Intended Audience :: Science/Research" ,
14+ " Topic :: Scientific/Engineering :: Image Recognition" ,
15+ " License :: OSI Approved :: Apache Software License" ,
16+ " Programming Language :: Python :: 3.10" ,
17+ " Programming Language :: Python :: 3.11" ,
18+ " Programming Language :: Python :: 3.12" ,
1919]
2020license = " Apache-2.0"
2121requires-python = " >=3.10"
2222dependencies = [
23- " attrs" ,
24- " dipy>=1.5.0" ,
25- " joblib" ,
26- " nipype>= 1.5.1,<2.0" ,
27- " nitransforms>=22.0.0,<24" ,
28- " nireports" ,
29- " numpy>=1.21.3" ,
30- " nest-asyncio>=1.5.1" ,
31- " scikit-image>=0.15.0" ,
32- " scikit_learn>=1.3.0" ,
33- " scipy>=1.8.0" ,
34- " typing_extensions >=4.12" ,
23+ " attrs" ,
24+ " dipy>=1.5.0" ,
25+ " joblib" ,
26+ " nipype>= 1.5.1,<2.0" ,
27+ " nitransforms>=22.0.0,<24" ,
28+ " nireports" ,
29+ " numpy>=1.21.3" ,
30+ " nest-asyncio>=1.5.1" ,
31+ " scikit-image>=0.15.0" ,
32+ " scikit_learn>=1.3.0" ,
33+ " scipy>=1.8.0" ,
34+ " typing_extensions >=4.12" ,
3535]
3636dynamic = [" version" ]
3737
@@ -42,37 +42,37 @@ NiPreps = "https://www.nipreps.org/"
4242
4343[project .optional-dependencies ]
4444doc = [
45- " attrs >= 20.1.0" ,
46- " furo >= 2024.01.29" ,
47- " matplotlib >= 2.2.0" ,
48- " nbsphinx" ,
49- " packaging" ,
50- " pydot >= 1.2.3" ,
51- " pydotplus" ,
52- " sphinx >= 4.5, <8" ,
53- " sphinx-argparse" ,
54- " sphinx_rtd_theme" ,
55- " sphinxcontrib-apidoc" ,
56- " sphinxcontrib-napoleon" ,
57- " sphinxcontrib-versioning" ,
58- " sphinx-argparse" ,
59- " sphinxcontrib-bibtex" ,
45+ " attrs >= 20.1.0" ,
46+ " furo >= 2024.01.29" ,
47+ " matplotlib >= 2.2.0" ,
48+ " nbsphinx" ,
49+ " packaging" ,
50+ " pydot >= 1.2.3" ,
51+ " pydotplus" ,
52+ " sphinx >= 4.5, <8" ,
53+ " sphinx-argparse" ,
54+ " sphinx_rtd_theme" ,
55+ " sphinxcontrib-apidoc" ,
56+ " sphinxcontrib-napoleon" ,
57+ " sphinxcontrib-versioning" ,
58+ " sphinx-argparse" ,
59+ " sphinxcontrib-bibtex" ,
6060]
6161dev = [
62- " ruff" ,
63- " pre-commit" ,
64- " pre-commit-hooks" ,
62+ " ruff" ,
63+ " pre-commit" ,
64+ " pre-commit-hooks" ,
6565]
6666plotting = [" nilearn" ]
6767resmon = [" psutil >=5.4" ]
6868test = [
69- " coverage" ,
70- " ipykernel" ,
71- " mriqc-learn" ,
72- " pytest >= 4.4" ,
73- " pytest-cov" ,
74- " pytest-env" ,
75- " pytest-xdist >= 1.28"
69+ " coverage" ,
70+ " ipykernel" ,
71+ " mriqc-learn" ,
72+ " pytest >= 4.4" ,
73+ " pytest-cov" ,
74+ " pytest-env" ,
75+ " pytest-xdist >= 1.28"
7676]
7777types = [
7878 " pandas-stubs" ,
@@ -84,22 +84,22 @@ types = [
8484 " pytest" ,
8585]
8686notebooks = [
87- " jupyter" ,
88- " nbclient" ,
89- " nbmake" ,
90- " mriqc_learn" ,
91- " nipreps-synthstrip" ,
87+ " jupyter" ,
88+ " nbclient" ,
89+ " nbmake" ,
90+ " mriqc_learn" ,
91+ " nipreps-synthstrip" ,
9292]
9393antsopt = [
94- " ConfigSpace" ,
95- " nipreps" ,
96- " scikit-image" ,
97- " smac" ,
94+ " ConfigSpace" ,
95+ " nipreps" ,
96+ " scikit-image" ,
97+ " smac" ,
9898]
9999benchmark = [
100- " asv" ,
101- " pyperf" ,
102- " virtualenv==20.30" ,
100+ " asv" ,
101+ " pyperf" ,
102+ " virtualenv==20.30" ,
103103]
104104
105105# Aliases
@@ -211,10 +211,10 @@ addopts = "-v --doctest-modules"
211211doctest_optionflags = " ALLOW_UNICODE NORMALIZE_WHITESPACE ELLIPSIS"
212212env = " PYTHONHASHSEED=0"
213213markers = [
214- " random_gtab_data: Custom marker for random gtab data tests" ,
215- " random_dwi_data: Custom marker for random dwi data tests" ,
216- " random_uniform_ndim_data: Custom marker for random multi-dimensional data tests" ,
217- " random_uniform_spatial_data: Custom marker for random spatial data tests" ,
214+ " random_gtab_data: Custom marker for random gtab data tests" ,
215+ " random_dwi_data: Custom marker for random dwi data tests" ,
216+ " random_uniform_ndim_data: Custom marker for random multi-dimensional data tests" ,
217+ " random_uniform_spatial_data: Custom marker for random spatial data tests" ,
218218]
219219filterwarnings = [
220220 " ignore::DeprecationWarning" ,
@@ -229,19 +229,19 @@ branch = true
229229parallel = true
230230concurrency = [' multiprocessing' ]
231231omit = [
232- ' */tests/*' ,
233- ' */testing/*' ,
234- ' */viz/*' ,
235- ' */__init__.py' ,
236- ' */conftest.py' ,
237- ' src/nifreeze/_version.py'
232+ ' */tests/*' ,
233+ ' */testing/*' ,
234+ ' */viz/*' ,
235+ ' */__init__.py' ,
236+ ' */conftest.py' ,
237+ ' src/nifreeze/_version.py'
238238]
239239
240240[tool .coverage .report ]
241241# Regexes for lines to exclude from consideration
242242exclude_lines = [
243- ' raise NotImplementedError' ,
244- ' warnings\.warn' ,
243+ ' raise NotImplementedError' ,
244+ ' warnings\.warn' ,
245245]
246246
247247[tool .codespell ]
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