Merge pull request #48 from nipreps/sty/run-latest-ruff

STY: Run latest version of *ruff*

Author: oesteban

.maint/update_authors.py

@@ -188,7 +188,7 @@ def zenodo(
     misses = set(miss_creators).intersection(miss_contributors)
     if misses:
         print(
-            "Some people made commits, but are missing in .maint/ " f"files: {', '.join(misses)}",
+            f"Some people made commits, but are missing in .maint/ files: {', '.join(misses)}",
             file=sys.stderr,
         )
 
@@ -268,7 +268,7 @@ def _aslist(value):
 
     if misses:
         print(
-            "Some people made commits, but are missing in .maint/ " f"files: {', '.join(misses)}",
+            f"Some people made commits, but are missing in .maint/ files: {', '.join(misses)}",
             file=sys.stderr,
         )
 

scripts/optimize_registration.py

@@ -200,7 +200,7 @@ async def train_coro(
         f"Avg. p95 initial error: {np.mean(start):0.2f} mm."
     )
     if verbose:
-        logger.info(f"\n\nParameters:\n{align_kwargs}" f"\n\nConversions folder: {tmp_folder}.")
+        logger.info(f"\n\nParameters:\n{align_kwargs}\n\nConversions folder: {tmp_folder}.")
 
     return error
 

src/nifreeze/conftest.py

@@ -25,8 +25,8 @@
 import os
 from pathlib import Path
 
-import nibabel
-import numpy
+import nibabel as nb
+import numpy as np
 import pytest
 
 test_data_env = os.getenv("TEST_DATA_HOME", str(Path.home() / "nifreeze-tests"))
@@ -39,16 +39,16 @@
 def pytest_report_header(config):
     return f"""\
 TEST_DATA_HOME={test_data_env}.
-TEST_OUTPUT_DIR={test_output_dir or '<unset> (output files will be discarded)'}.
-TEST_WORK_DIR={test_workdir or '<unset> (intermediate files will be discarded)'}.
+TEST_OUTPUT_DIR={test_output_dir or "<unset> (output files will be discarded)"}.
+TEST_WORK_DIR={test_workdir or "<unset> (intermediate files will be discarded)"}.
 """
 
 
 @pytest.fixture(autouse=True)
 def doctest_imports(doctest_namespace):
     """Populates doctests with some conveniency imports."""
-    doctest_namespace["np"] = numpy
-    doctest_namespace["nb"] = nibabel
+    doctest_namespace["np"] = np
+    doctest_namespace["nb"] = nb
     doctest_namespace["os"] = os
     doctest_namespace["Path"] = Path
     doctest_namespace["repodata"] = _datadir

src/nifreeze/estimator.py

@@ -90,7 +90,7 @@ def estimate(
         } | iter_kwargs
         iter_kwargs["size"] = len(data)
 
-        iterfunc = getattr(iterators, f'{iter_kwargs.pop("strategy", "random")}_iterator')
+        iterfunc = getattr(iterators, f"{iter_kwargs.pop('strategy', 'random')}_iterator")
         index_order = list(iterfunc(**iter_kwargs))
 
         align_kwargs = align_kwargs or {}

test/conftest.py

@@ -25,8 +25,8 @@
 import os
 from pathlib import Path
 
-import nibabel
-import numpy
+import nibabel as nb
+import numpy as np
 import pytest
 
 test_data_env = os.getenv("TEST_DATA_HOME", str(Path.home() / "nifreeze-tests"))
@@ -39,16 +39,16 @@
 def pytest_report_header(config):
     return f"""\
 TEST_DATA_HOME={test_data_env}.
-TEST_OUTPUT_DIR={test_output_dir or '<unset> (output files will be discarded)'}.
-TEST_WORK_DIR={test_workdir or '<unset> (intermediate files will be discarded)'}.
+TEST_OUTPUT_DIR={test_output_dir or "<unset> (output files will be discarded)"}.
+TEST_WORK_DIR={test_workdir or "<unset> (intermediate files will be discarded)"}.
 """
 
 
 @pytest.fixture(autouse=True)
 def doctest_imports(doctest_namespace):
     """Populates doctests with some conveniency imports."""
-    doctest_namespace["np"] = numpy
-    doctest_namespace["nb"] = nibabel
+    doctest_namespace["np"] = np
+    doctest_namespace["nb"] = nb
     doctest_namespace["os"] = os
     doctest_namespace["Path"] = Path
     doctest_namespace["repodata"] = _datadir