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```
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* .larger[*fMRIPrep*]
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``` Bash
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- docker pull nipreps/fmriprep:24.0.1rc0
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+ docker pull nipreps/fmriprep:24.1.0rc0
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```
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]
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#SBATCH --time=1:00:00 #NOTE: likely longer than generally needed
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#SBATCH --ntasks 1
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#SBATCH --cpus-per-task=16
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- #SBATCH --mem-per-cpu=4G
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- #SBATCH --partition=public-cpu
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+ #SBATCH --mem-per-cpu=1G
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+ #SBATCH --partition=shared-cpu
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+ #SBATCH --reservation=share_courvoisier_workshop_570
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# Outputs ----------------------------------
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#SBATCH --output log/%x-%A-%a.out
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We only run T1w images (`-m T1w`), we make it more verbose `-vv`,
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we name the dataset (`--dsname bootcamp`), we allow the workflow
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- to run up to 16 processes with up to 8 cores each `--nprocs 16 --omp-nthreads 8`,
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- and preserve the intermediate files at `$HOME/scratch/work`:
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+ to run up to 16 processes with up to 8 cores each `--nprocs 16 --omp-nthreads 8`:
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``` Bash
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- -m T1w -vv --dsname bootcamp --nprocs 16 --omp-nthreads 8 \
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- -w $HOME/scratch/work
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+ -m T1w -vv --dsname bootcamp --nprocs 16 --omp-nthreads 8
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```
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