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lines changed Original file line number Diff line number Diff line change 900
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# Standardizing preprocessing: validation
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+ .boxed-content.center[
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+ < img src ="./images/fmriprep-validation-smoothness.png " width ="95% " /> < br />
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+ (< a href ="https://doi.org/10.1038/s41592-018-0235-4 "> Esteban et al., 2019</ a > )
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+ ]
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+
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+ ---
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+ count:false
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+
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+ # Standardizing preprocessing: validation
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+
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+ .boxed-content.center[
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+ < img src ="./images/fmriprep-validation-smoothness-2.png " width ="46% " /> < br />
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+ (< a href ="https://doi.org/10.1038/s41592-018-0235-4 "> Esteban et al., 2019</ a > )
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+ ]
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+
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+ ---
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+ count:false
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+
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+ # Standardizing preprocessing: validation
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+
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+ .boxed-content.center[
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+ < img src ="./images/fmriprep-validation-workflow.png " width ="40% " /> < br />
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+ (< a href ="https://doi.org/10.1038/s41592-018-0235-4 "> Esteban et al., 2019</ a > )
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+ ]
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---
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< p align ="center ">
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## What do you think/know about BIDS?
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]]
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- ---
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-
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- # Outlook
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-
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- .right-column3.center[
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- < a href ="https://www.nipreps.org/assets/fmriprep-bootcamp-geneva2024/day1-02-bids/ ">
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- < img src ="images/qr-talk-url.svg " alt ="workflow " style ="width: 100% " />
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- < br />
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- https://www.nipreps.org/assets/fmriprep-bootcamp-geneva2024/day1-02-bids/
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- </ a >
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- ]
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-
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- .left-column3[
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- .large[
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- *
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- ]]
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- ???
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---
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layout: true
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template: newsection
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| 9h30 | Resource planning, parallelization |
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| 10h30 | Coffee break |
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| 10h45 | Analysis of the *mixed* task |
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- | 12h00 | Lunch break |
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- | 13h30 | MRIQC and QA/QC |
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+ | 12h30 | Lunch break |
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+ | 14h00 | MRIQC and QA/QC |
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| 15h00 | Coffee break |
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| 15h15 | Hands-on: Running *fMRIPrep* on your data on cluster |
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| 16h00 | Preparation of the hackathon (groups, projects) |
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| 9h00 | Project pitches |
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| | Coffee break |
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| | **Hacking!** |
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- | 12h00 | Lunch break |
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- | 13h00 | **Hacking!** |
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+ | 12h30 | Lunch break |
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+ | 14h00 | **Hacking!** |
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| 15h00 | Coffee break |
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| 15h15 | Round table and showcasing results |
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| 16h30 | End |
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* .larger[or the objective can be shared with others]
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]
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+ ---
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+
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+ # Introductions
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+ .boxed-content.large[
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+ * Everyone will be up for 45 secs.
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+ ]
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</ textarea >
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< script src ="https://remarkjs.com/downloads/remark-latest.min.js "> </ script >
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< script src ="/assets/asciinema-player/asciicast-load.js "> </ script >
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